TCONS_00011108-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00011108-protein
Unique NameTCONS_00011108-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length630

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00011108-protein ID=TCONS_00011108-protein|Name=TCONS_00011108-protein|organism=Clytia hemisphaerica|type=polypeptide|length=630bp
MAEGIEIDDLTWRTEIALCMKQPDLPKLRDLCRGRKIPDDCRPQIWKIAL
NVIGKPDALVTWDGLLDMGEQDVLKEDCILQAAKMKLAEEDEEEVSRDME
GLITFFCKSRGEKYRSSSGLVELLSPFITLNLPLCEVYNCFYAMQARFIP
RECYRDGKPFHLFRQLLQYHDPQLCSFLDSRKISPDSYAQKWLRSLFVCI
CDSEVIHAMWDYYYLESDPYFVFFLMLVMVLNAKDQILENSTKSKASIIE
MITNFPAQLGAEDIEDFCALAHYYAVRTPTSYRKDFQPFLFGTKITVNDY
ISNSLCLQISLVELLEAVEGRSNTDVKFCLVDCRPAEHYNNGHLPTAFHL
DANLMLQEPEEFQTAVAALFATQQQSIEAGSNAGGEHLCFVGSGRESEDQ
YVNMVVANFLQRGTHFVSIAKGGYSAVHELLADDLTGNLVDHDSKKCIVC
SPEAFSSEDESHEMSQGESSSDTPMSPKMSATRSGLVDKISSSILNRGVD
VRERLGRLITESNKAQVERHVSENDKTGKRYRGVNLDIFSIEDPDDAVAS
SSDEHQEAVNIDTWVKRSDVIRHFPCSEITGSGQMYSSYILLTPSQLFIL
REIVDKERPGWANXYSAHAIATFHTTRNRR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_006219XLOC_006219Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00011108TCONS_00011108Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000195Rab-GTPase-TBC_dom
IPR001763Rhodanese-like_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000195Rab-GTPase-TBC domainSMARTSM00164tbc_4coord: 33..241
e-value: 1.8E-4
score: 13.8
IPR000195Rab-GTPase-TBC domainPFAMPF00566RabGAP-TBCcoord: 74..238
e-value: 1.6E-15
score: 57.2
IPR000195Rab-GTPase-TBC domainPROSITEPS50086TBC_RABGAPcoord: 36..217
score: 12.999
IPR000195Rab-GTPase-TBC domainSUPERFAMILY47923Ypt/Rab-GAP domain of gyp1pcoord: 161..274
IPR001763Rhodanese-like domainPFAMPF00581Rhodanesecoord: 318..428
e-value: 3.8E-8
score: 33.7
IPR001763Rhodanese-like domainGENE3D3.40.250.10coord: 306..470
e-value: 7.8E-11
score: 41.4
IPR001763Rhodanese-like domainPROSITEPS50206RHODANESE_3coord: 324..436
score: 10.213
IPR001763Rhodanese-like domainSUPERFAMILY52821Rhodanese/Cell cycle control phosphatasecoord: 308..429

Blast
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BLAST of TCONS_00011108-protein vs. Swiss-Prot (Human)
Match: TBC23 (TBC1 domain family member 23 OS=Homo sapiens GN=TBC1D23 PE=1 SV=3)

HSP 1 Score: 535.798 bits (1379), Expect = 0.000e+0
Identity = 283/655 (43.21%), Postives = 409/655 (62.44%), Query Frame = 0 
Query:    1 MAEGIEIDDLT------WRTEI--ALCMKQPDLPKLRDLCRGRKIPDDCRPQIWKIALNVIGKPDALVTWDGLLDMGEQDVLKEDCILQAAKMKLAEEDEEEVSRDMEGLITFFCKSRGEKYRSSSGLVELLSPFITLNLPLCEVYNCFYAMQARFIPRECYRDGKPFHLFRQLLQYHDPQLCSFLDSRKISPDSYAQKWLRSLFVCICDSEVIHAMWDYYYLESDPYFVFFLMLVMVLNAKDQILENSTKSKASIIEMITNFPAQLGAEDIEDFCALAHYYAVRTPTSYRKDFQPFLFGTKITVND---YISNSLCLQISLVELLEAVEGRSNTDVKFCLVDCRPAEHYNNGHLPTAFHLDANLMLQEPEEFQTAVAALFATQQQSIEAGSNAGGEHLCFVGSGRESEDQYVNMVVANFLQRGTHFVSIAKGGYSAVHELLADDLTGNLVDHDSKKCIVCSPE-AFSSEDESHEMSQGESSSDTPMSPKMSATRS--GLVDKISSSILNRGVDVRERLGRLITES--------------NKAQVERHVSENDKTGKRYRGVNLDIFSIEDPDD-------AVASSSDEHQEAVNIDTWVKRSDVIRHFPCSEITGSGQMYSSYILLTPSQLFILREIVDKERPGWANXYSAHAI 620
            MAEG ++  L       W  ++  AL     DL  LR++ +GR +P D R ++WKIALNV GK D+L +WDG+LD+ EQ+ + +DC+    ++ + EE   E+  D+E +ITF+CKSR  KY +S   + LL P + L LP  ++YNCFYA+  ++IPR+C + G+PFHLFR L+QYH+P+LCS+LD++KI+PDSYA  WL SLF C C +EV  A+WD Y  ++DP+F++FLML++++NAK+ IL   + SK  +I+ + N P+ L  EDIED  +LA YY  +TP S+RKD       T + + D    +S +LCL IS+ E+L+A + +    V+F +VDCRPAE YN GHL TAFHLD++LMLQ P EF  +V +L   Q+QSIE+GS AGGEHLCF+GSGRE ED Y+NMV+A+FLQ+   +VSIA GG+ A+ + LAD               V  PE  +     S   S+   +S    SP  S+ R    LV+K++ ++  + V+VRE++   I  +              +++  ERHVS +D+ GK YRGV   +FSI D ++       + + S D+ +E VNI TW+ + DV  HFPC E+  SG M+ S++L+T + ++ LREIV   R G A   S  A+
Sbjct:    1 MAEGEDVPPLPTSSGDGWEKDLEEALEAGGCDLETLRNIIQGRPLPADLRAKVWKIALNVAGKGDSLASWDGILDLPEQNTIHKDCLQFIDQLSVPEEKAAELLLDIESVITFYCKSRNIKYSTSLSWIHLLKPLVHLQLPRSDLYNCFYAIMNKYIPRDCSQKGRPFHLFRLLIQYHEPELCSYLDTKKITPDSYALNWLGSLFACYCSTEVTQAIWDGYLQQADPFFIYFLMLIILVNAKEVILTQESDSKEEVIKFLENTPSSLNIEDIEDLFSLAQYYCSKTPASFRKDNHHLFGSTLLGIKDDDADLSQALCLAISVSEILQANQLQGE-GVRFFVVDCRPAEQYNAGHLSTAFHLDSDLMLQNPSEFAQSVKSLLEAQKQSIESGSIAGGEHLCFMGSGREEEDMYMNMVLAHFLQKNKEYVSIASGGFMALQQHLAD-------------INVDGPENGYGHWIASTSGSRSSINSVDGESPNGSSDRGMKSLVNKMTVALKTKSVNVREKVISFIENTSTPVDRMSFNLPWPDRSCTERHVSSSDRVGKPYRGVK-PVFSIGDEEEYDTDEIDSSSMSDDDRKEVVNIQTWINKPDVKHHFPCKEVKESGHMFPSHLLVTATHMYCLREIVS--RKGLAYIQSRQAL 638
The following BLAST results are available for this feature:
BLAST of TCONS_00011108-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TBC230.000e+043.21TBC1 domain family member 23 OS=Homo sapiens GN=TB... [more]
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