TCONS_00011044-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00011044-protein
Unique Name	TCONS_00011044-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	532

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00011044-protein ID=TCONS_00011044-protein|Name=TCONS_00011044-protein|organism=Clytia hemisphaerica|type=polypeptide|length=532bp
YHQRRPSDIETNYQDGGTENNPQQQDGHHGDNEEDEEYKPILPKRYVLLL
MIFLGFAVVYSLRVNINVAIVAMVNNRTSLSKSGQIRIHVAEFNWDSHQQ
ALILGSFFYGYWVLQVPGAWIAMKLGPTRIFGYGVFLASLMSLITPVATR
YHVFGLAGVRIVQGLFLGVTYPCTIAIWAKWAPPLERSTMVTMAIAGSPV
GNIIAMPLTGVLAKYGFDGGWPTVFYFFGFLGCIWYVVWEFTIYDSPETH
PTISKKEKKFITKTIAEKPFDPLTESPPWGAIFTSIPMWGIIIGHFGACW
GYYTLFTQMPTYLKDIQHLDIKTMGLVAAIPYLFKAFLGPLGGITADLLV
RYRYLTIRGVRTLFYAVGCLLAGFFILMTGYYVKVGEAIAFLILGVGFSG
LNAVGYAVNHLDIAPRYAGILMGVSNSFASIPGFLSPMVTGHIAKNKKAS
EWKTVFWITFIIYVVAVALYTVMCSGEKQWWAEGYPPEEVEAPLIGEEEE
QENELGENLLPAETTKEKREENAKGITQGLKS

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_006189	XLOC_006189	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00011044	TCONS_00011044	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR011701	MFS
IPR020846	MFS_dom

Vocabulary: **Biological Process**
Term	Definition
GO:0055085	transmembrane transport

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016021	integral component of membrane

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.20.1250.20		coord: 43..261 e-value: 2.6E-28 score: 98.2
None	No IPR available	GENE3D	1.20.1250.20		coord: 273..484 e-value: 5.7E-24 score: 84.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..37
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 491..532
IPR011701	Major facilitator superfamily	PFAM	PF07690	MFS_1	coord: 52..437 e-value: 1.1E-51 score: 175.7
IPR020846	Major facilitator superfamily domain	PROSITE	PS50850	MFS	coord: 47..478 score: 21.82
IPR020846	Major facilitator superfamily domain	CDD	cd06174	MFS	coord: 49..473 e-value: 1.08934E-38 score: 143.608
IPR020846	Major facilitator superfamily domain	SUPERFAMILY	103473	MFS general substrate transporter	coord: 25..483

Blast

[Close]

BLAST of TCONS_00011044-protein vs. Swiss-Prot (Human)
Match: VGLU1 (Vesicular glutamate transporter 1 OS=Homo sapiens GN=SLC17A7 PE=2 SV=1)

HSP 1 Score: 387.497 bits (994), Expect = 5.193e-129
Identity = 201/482 (41.70%), Postives = 285/482 (59.13%), Query Frame = 0

Query:   42 LPKRYVLLLMIFLGFAVVYSLRVNINVAIVAMVNNRTSLSKSGQIRIHVAEFNWDSHQQALILGSFFYGYWVLQVPGAWIAMKLGPTRIFGYGVFLASLMSLITPVATRYHVFGLAGVRIVQGLFLGVTYPCTIAIWAKWAPPLERSTMVTMAIAGSPVGNIIAMPLTGVLAKYGFDGGWPTVFYFFGFLGCIWYVVWEFTIYDSPETHPTISKKEKKFITKTIAE--KPFDPLTE-SPPWGAIFTSIPMWGIIIGHFGACWGYYTLFTQMPTYLKDIQHLDIKTMGLVAAIPYLFKAFLGPLGGITADLLVRYRYLTIRGVRTLFYAVGCLLAGFFILMTGYYVKVGEAIAFLILGVGFSGLNAVGYAVNHLDIAPRYAGILMGVSNSFASIPGFLSPMVTGHIAKNKKASEWKTVFWITFIIYVVAVALYTVMCSGEKQWWAEGYPPEEVEAPLIGEEEEQENELGENLLPAETTKEKRE 520
            LP+RY++ +M  LGF + + +R N+ VAIV+MVNN T+  + G + +  A+F+WD     LI GSFF+GY V Q+PG +I  K    R+FG+ +   S ++++ P A R H   +  VRI+QGL  GVTYP    IW+KWAPPLERS + T A  GS  G ++AMPL GVL +Y    GW +VFY +G  G  WY+ W    Y+SP  HP+IS++E+K+I   I E  K  +PLT+ S PW   FTS+P++ II+ +F   W +Y L    P Y +++   +I  +GLV+A+P+L    + P+GG  AD L   R ++   VR L    G  +    +L+ GY    G AI+FL+L VGFSG    G+ VNHLDIAPRYA ILMG+SN   ++ G + P++ G + K+K   EW+ VF I  +++   V  Y V  SGEKQ WAE   PEE+        EE+   +G + L      E  +
Sbjct:   59 LPRRYIIAIMSGLGFCISFGIRCNLGVAIVSMVNNSTT-HRGGHVVVQKAQFSWDPETVGLIHGSFFWGYIVTQIPGGFICQKFAANRVFGFAIVATSTLNMLIPSAARVHYGCVIFVRILQGLVEGVTYPACHGIWSKWAPPLERSRLATTAFCGSYAGAVVAMPLAGVLVQYS---GWSSVFYVYGSFGIFWYLFWLLVSYESPALHPSISEEERKYIEDAIGESAKLMNPLTKFSTPWRRFFTSMPVYAIIVANFCRSWTFYLLLISQPAYFEEVFGFEISKVGLVSALPHLVMTIIVPIGGQIADFLRSRRIMSTTNVRKLMNCGGFGMEATLLLVVGYSHSKGVAISFLVLAVGFSGFAISGFNVNHLDIAPRYASILMGISNGVGTLSGMVCPIIVGAMTKHKTREEWQYVFLIASLVHYGGVIFYGVFASGEKQPWAE---PEEM-------SEEKCGFVGHDQLAGSDDSEMED 526

The following BLAST results are available for this feature:

BLAST of TCONS_00011044-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00011044-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
VGLU1	5.193e-129	41.70	Vesicular glutamate transporter 1 OS=Homo sapiens ...	[more]

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TCONS_00011044-protein (polypeptide) - C. hemisphaerica