TCONS_00010938-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00010938-protein
Unique NameTCONS_00010938-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length242

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00010938-protein ID=TCONS_00010938-protein|Name=TCONS_00010938-protein|organism=Clytia hemisphaerica|type=polypeptide|length=242bp
MLSLRSLVFVFCCALVFGAVEDSKDGVEFEVGGKPDQANIKRLFTKLKTV
PAFDDTESSGDSDDTEKGSGEEGDSEEGSGSGSGVGDGNEPSIVVVQTVE
PTTKAKTTKAIEKSTVVDINEVTTDEPKQKTTQGNDIIIDAGKPTILYGG
DEENNNVDDELPTSRQQQKQQKQNDEPTGVNFTVGIIVGVVVGAILAILV
IVFLVYRLRKKDEGSYSLDEPSSQAFIRDEKSNPGQGKEYYA
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_006143XLOC_006143Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00010938TCONS_00010938Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027789Syndecan/Neurexin_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027789Syndecan/Neurexin domainPFAMPF01034Syndecancoord: 182..224
e-value: 6.1E-19
score: 67.6
NoneNo IPR availableGENE3D1.20.5.100coord: 165..213
e-value: 9.9E-7
score: 27.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 149..177
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 215..242
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 52..90

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00010938-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top