TCONS_00010880-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00010880-protein
Unique NameTCONS_00010880-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length719

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00010880-protein ID=TCONS_00010880-protein|Name=TCONS_00010880-protein|organism=Clytia hemisphaerica|type=polypeptide|length=719bp
MSKTQDGGLNLASYLPKMSFDRQTTLLKLLILSIACILSFSTRLFSVLRF
ESVIHEFDPYFNYRTTQYLASEGFYEFHNWFDDRAWYPLGRIIGGTIYPG
LMVTSAILYHVMHFFHITIEVRNVCVFLAPLFSSFTALVTYQLTKELKDS
GAGLIAASMIAIVPGYISRSVAGSYDNEGIAIFCMLLTYWLWIKSVKSGS
LLWSTLCSLAYFYMVSSWGGYVFLINLIPMHVFALMLTGRFSHRIYVAYS
TVYCIGTILSMQISFVGFQPVQTSEHMAALGIFGLCQIHAFVDYLRFRLS
AKHFEILFKSLVILSATIAGIIGAILTITGKVAPWTGRFYSLLDPSYAKN
NIPIIASVSEHQPTTWSSFYFDLQMLVFMFPVGLYYCFSKLTDANIFIII
YGVTSIYFAGVMVRLMLVLAPVACILAGIGISSVLSTYMKNVELTSSQQP
AQKHPNRKGKQTDPSYPIKNEVATFMVGLVTFFLISYTFHCTWVTSEAYS
SPSIVLSAKQNDGSRIIFDDFREAYYWLRQNTPEDAKVMSWWDYGYQITA
MANRTILVDNNTWNNTHISRVGQAMASPEDKAYEIMRELDVNYVLVIFGG
LTGYASDDINKFLWMVRIGGSTDTGKHIKEHDYYTPAGEFRIDKDGSPTL
LNCLMYKMCFYRFGAVYTEQGKPTGYDRVRNAEIGNKEFELDVLEEAYTT
EHWLVRIYKVKDLDNRGTA
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_006111XLOC_006111Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00010880TCONS_00010880Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003674Oligo_trans_STT3
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0004576oligosaccharyl transferase activity
Vocabulary: Biological Process
TermDefinition
GO:0006486protein glycosylation
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006486 protein glycosylation
cellular_component GO:0016020 membrane
molecular_function GO:0004576 oligosaccharyl transferase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003674Oligosaccharyl transferase, STT3 subunitPFAMPF02516STT3coord: 26..500
e-value: 3.8E-148
score: 494.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 446..465

Blast
[Close]
BLAST of TCONS_00010880-protein vs. Swiss-Prot (Human)
Match: STT3A (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A OS=Homo sapiens GN=STT3A PE=1 SV=2)

HSP 1 Score: 1206.05 bits (3119), Expect = 0.000e+0
Identity = 568/702 (80.91%), Postives = 645/702 (91.88%), Query Frame = 0 
Query:   17 KMSFDRQTTLLKLLILSIACILSFSTRLFSVLRFESVIHEFDPYFNYRTTQYLASEGFYEFHNWFDDRAWYPLGRIIGGTIYPGLMVTSAILYHVMHFFHITIEVRNVCVFLAPLFSSFTALVTYQLTKELKDSGAGLIAASMIAIVPGYISRSVAGSYDNEGIAIFCMLLTYWLWIKSVKSGSLLWSTLCSLAYFYMVSSWGGYVFLINLIPMHVFALMLTGRFSHRIYVAYSTVYCIGTILSMQISFVGFQPVQTSEHMAALGIFGLCQIHAFVDYLRFRLSAKHFEILFKSLVILSATIAGIIGAILTITGKVAPWTGRFYSLLDPSYAKNNIPIIASVSEHQPTTWSSFYFDLQMLVFMFPVGLYYCFSKLTDANIFIIIYGVTSIYFAGVMVRLMLVLAPVACILAGIGISSVLSTYMKNVELTSSQQPAQKHPNRKG-KQTDPSYPIKNEVATFMVGLVTFFLISYTFHCTWVTSEAYSSPSIVLSAKQNDGSRIIFDDFREAYYWLRQNTPEDAKVMSWWDYGYQITAMANRTILVDNNTWNNTHISRVGQAMASPEDKAYEIMRELDVNYVLVIFGGLTGYASDDINKFLWMVRIGGSTDTGKHIKEHDYYTPAGEFRIDKDGSPTLLNCLMYKMCFYRFGAVYTEQGKPTGYDRVRNAEIGNKEFELDVLEEAYTTEHWLVRIYKVKDLDNRG 717
            ++S+++Q TLLKLLILS+A +LSFSTRLF+VLRFESVIHEFDPYFNYRTT++LA EGFY+FHNWFDDRAWYPLGRIIGGTIYPGLM+TSA +YHV+HFFHITI++RNVCVFLAPLFSSFT +VTY LTKELKD+GAGL+AA+MIA+VPGYISRSVAGSYDNEGIAIFCMLLTY++WIK+VK+GS+ W+  C+LAYFYMVSSWGGYVFLINLIP+HV  LMLTGRFSHRIYVAY TVYC+GTILSMQISFVGFQPV +SEHMAA G+FGLCQIHAFVDYLR +L+ + FE+LF+S++ L   +   +GA+L +TGK++PWTGRFYSLLDPSYAKNNIPIIASVSEHQPTTWSS+YFDLQ+LVFMFPVGLYYCFS L+DA IFII+YGVTS+YF+ VMVRLMLVLAPV CIL+GIG+S VLSTYMKN++++         P++K  KQ D +YPIKNEVA+ M+ ++ FFLI+YTFH TWVTSEAYSSPSIVLSA+  DGSRIIFDDFREAYYWLR NTPEDAKVMSWWDYGYQITAMANRTILVDNNTWNNTHISRVGQAMAS E+KAYEIMRELDV+YVLVIFGGLTGY+SDDINKFLWMVRIGGSTDTGKHIKE+DYYTP GEFR+D++GSP LLNCLMYKMC+YRFG VYTE  +P G+DRVRNAEIGNK+FELDVLEEAYTTEHWLVRIYKVKDLDNRG
Sbjct:    8 RLSYEKQDTLLKLLILSMAAVLSFSTRLFAVLRFESVIHEFDPYFNYRTTRFLAEEGFYKFHNWFDDRAWYPLGRIIGGTIYPGLMITSAAIYHVLHFFHITIDIRNVCVFLAPLFSSFTTIVTYHLTKELKDAGAGLLAAAMIAVVPGYISRSVAGSYDNEGIAIFCMLLTYYMWIKAVKTGSICWAAKCALAYFYMVSSWGGYVFLINLIPLHVLVLMLTGRFSHRIYVAYCTVYCLGTILSMQISFVGFQPVLSSEHMAAFGVFGLCQIHAFVDYLRSKLNPQQFEVLFRSVISLVGFVLLTVGALLMLTGKISPWTGRFYSLLDPSYAKNNIPIIASVSEHQPTTWSSYYFDLQLLVFMFPVGLYYCFSNLSDARIFIIMYGVTSMYFSAVMVRLMLVLAPVMCILSGIGVSQVLSTYMKNLDIS--------RPDKKSKKQQDSTYPIKNEVASGMILVMAFFLITYTFHSTWVTSEAYSSPSIVLSARGGDGSRIIFDDFREAYYWLRHNTPEDAKVMSWWDYGYQITAMANRTILVDNNTWNNTHISRVGQAMASTEEKAYEIMRELDVSYVLVIFGGLTGYSSDDINKFLWMVRIGGSTDTGKHIKENDYYTPTGEFRVDREGSPVLLNCLMYKMCYYRFGQVYTEAKRPPGFDRVRNAEIGNKDFELDVLEEAYTTEHWLVRIYKVKDLDNRG 701
The following BLAST results are available for this feature:
BLAST of TCONS_00010880-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
STT3A0.000e+080.91Dolichyl-diphosphooligosaccharide--protein glycosy... [more]
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