TCONS_00010800-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00010800-protein
Unique NameTCONS_00010800-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2067

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00010800-protein ID=TCONS_00010800-protein|Name=TCONS_00010800-protein|organism=Clytia hemisphaerica|type=polypeptide|length=2067bp
METDVSKLDIPPELAAVFSRLHLWEPLHLDANVCAVSGVTPWEYCGIALP
ADLNTCVFSKFIRLYFQNIDDYKHSKYPIRSSLLRLKNVSSAEAVQVFKL
VLRFMEDENMTGVQQYILGNYIINKGIASVDLRDEIYTQLCRQLWKNPQR
TSVLRGWLLMGLCLCTFPPTRRMEKYLLKYISDHAFEGYNKFIQKKCIVW
ENDELATGRTYPPTLIEWKALKENALLSLNCYMADGYSRVIEVDSSSSCE
EAARSFLSVRKMEDLDTVGWSFILNFQRLSMFAPGSEPMLDLVSILELPP
VFPGQTANTLLSLDRTNQIPTEHMDVVIQSHNTPMNRVVPTYKHQESVFE
NKKIQDRQQQSPQPIVQDLLHLKESNAQLPESKLESTEIQNVMHSEQRRE
FEDVFTPRKYVSQPAFKVKNSEPSPQFYYHPQSVQKEYVYHVQKEEPVYV
QNSTFAPVAKPPTEVQQVQRQEPVFQKHSFVTQQKPSEELKDYHDTTEIK
RTHIIRHVKPEPIKNKEIVHVTQNYKPVERDIDIKRVQKRDVNIKKHAFV
SVPKQQEETEIKRVSSSKEEIVYEHVYKNHDDYLARADILYPANPAQQID
RIPLKDDSSVNAQIEKVEPDMFPMSKPPTPPPLPPIAVSNPPSTFTSRGN
TLKRTKPIVHKKTPWSMEEVLLKHRQMKPGLDKRYHPSYADDPENINFDQ
RLLDKITDLKRSRERLNDSFEDEQDTATNPQTLRSKDQTGEKNHYGEPTT
EIDREPTFKKQPIRKHYIDIDIDKEHQKKEKEASQVILDARKGLRKSNTK
NLQEEKTLDQPMVEQRTKDFDMDKLLNKNNLWLKDHGTLRPDKNSANSQE
STNFLVQSKNRLRPAEYSNQNSGFVNSVGTADNDREPIKRNWVDPKVRRF
PKQTVVDVTDDFRSADKRESPSILGSGGGSLSNASKKRLEEHAKRFEKRR
NSSGSRASSSGSESNFVDSVFKGVFADNDLTSADALVNKLKGGGNDLYYP
DRAMLRRQPSHRLSNNYNDSQSLDMLRTQQEQAEQRLHQNNAEKNNLFSH
VRVSNDPPIQTTTPWTRVVPINEIDHYSTNNNHRHQNHQDGILSTANYET
SNSIPKAPPPPPPAANKLISIKGLANQMERHNHGGGRMVPFLLKGSYVSY
TNTEWKIHLRKEIFLPKENLGKSLKEVIYRQILEDISSRTCCRLSGDDRY
KVQKVIDSGTSMENDILKQKVINAAKELPLYFARIYKFEGFNEHLYNYIA
ISHSGVRLAARNSLDETLIVTSYIQYTTIVDLRVENNVLNIVTVEKTIGV
HSNKAASMKKLISTYLKAAEKHRRYVKAINNHNSTEFGYLPFKKGNVIVI
YEKENVQPGYMWGVFKNKQGIFPASCVEDFDTGSVSSAGWLPSIIPIYQK
QDIDDFMSEDYDQYTLIDFAVRYFKASPTSDGVRVLNHDQEHPEYKYHSK
MVQFSKEPLNGPLINYKNKTWARQAVDVNRGIMKFMGDVRRDQQENDNDL
LYFLLKVPVPILPKQESLSGXRDQQENDNDLLYFLLKTGKENLDLTDEIL
CQLVKQTTFNTSENKESCGRGWKLLLFATSYFDCSSLLYPYLYKYFQSAA
EYYKEFNGAATVCMSNLRRSFEYGGRKEFPSLNELSMMTQGKQCKYQVVY
LPGKKEKLCKINTSTTVAVVIKDVCEELGLEMKEEHLEYGLFVYLHDKKV
FLPLEEKEYIFDVVIKLEKDGRKQISLAFRKLVWFQAMRFANNRFTETIY
DQVLPDVMNGFLLHHKGNRPSLARDQQIQNEVSLLAALQHRINNKHQAPT
LQEVASLIPAIVAPSLKPEQWLEMANEHFILVRHFTAMNARIKFLELLSA
WYYFGSSFFFINDCNHSAINEKCVLAVNKNGVHFLSTSKRDTLLSFNFQE
ILSTSSNTNSDDQKMFVDLRCGDLQNQRVIRIETPRVTKRPRGTGEPKGT
RFPLKTGRPTGTRAPRGSGKPTGTRGPRPTEVEDPSRGTWKPIGTRGQKK
TRKPKGTRGPRPTEVEDPSRGSQKPTGTRGPKGSRKPTGTRGPKGSEKPT
GTRGPRPTEVEDPRRGS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_006061XLOC_006061Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00010800TCONS_00010800Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019749Band_41_domain
IPR000857MyTH4_dom
IPR001452SH3_domain
IPR011993PH_dom-like
IPR019748FERM_central
IPR011511SH3_2
IPR000299FERM_domain
IPR029071Ubiquitin-rel_dom
Vocabulary: Cellular Component
TermDefinition
GO:0005856cytoskeleton
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005856 cytoskeleton
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 706..726
NoneNo IPR availableCOILSCoilCoilcoord: 1023..1043
NoneNo IPR availableGENE3D3.10.20.90coord: 1624..1733
e-value: 7.0E-9
score: 35.7
NoneNo IPR availableGENE3D3.10.20.90coord: 225..301
e-value: 0.3
score: 11.3
NoneNo IPR availableGENE3D2.30.30.40coord: 1328..1381
e-value: 1.7E-8
score: 33.5
NoneNo IPR availableCDDcd00174SH3coord: 1325..1376
e-value: 8.69724E-6
score: 44.3759
IPR019749Band 4.1 domainSMARTSM00295B41_5coord: 1641..1859
e-value: 7.4E-9
score: 45.4
IPR000857MyTH4 domainSMARTSM00139MyTH4_1coord: 1454..1639
e-value: 1.3E-15
score: 67.8
coord: 74..222
e-value: 1.5E-33
score: 127.5
IPR000857MyTH4 domainPFAMPF00784MyTH4coord: 119..220
e-value: 2.2E-25
score: 89.2
coord: 1530..1636
e-value: 9.6E-24
score: 83.9
IPR000857MyTH4 domainPROSITEPS51016MYTH4coord: 1454..1639
score: 41.621
IPR000857MyTH4 domainPROSITEPS51016MYTH4coord: 74..222
score: 43.566
IPR001452SH3 domainSMARTSM00326SH3_2coord: 1324..1381
e-value: 5.3E-6
score: 35.9
IPR001452SH3 domainPROSITEPS50002SH3coord: 1321..1382
score: 8.619
IPR001452SH3 domainSUPERFAMILY50044SH3-domaincoord: 1320..1393
IPR011993PH domain-likeGENE3D2.30.29.30coord: 1234..1327
e-value: 1.7E-6
score: 27.7
IPR011993PH domain-likeGENE3D2.30.29.30coord: 1854..1939
e-value: 3.0E-12
score: 46.4
IPR019748FERM central domainPFAMPF00373FERM_Mcoord: 1745..1859
e-value: 5.0E-6
score: 26.8
IPR019748FERM central domainCDDcd14473FERM_B-lobecoord: 1749..1851
e-value: 8.2232E-7
score: 48.3966
IPR019748FERM central domainSUPERFAMILY47031Second domain of FERMcoord: 1744..1854
IPR011511Variant SH3 domainPFAMPF07653SH3_2coord: 1325..1378
e-value: 1.0E-6
score: 28.2
IPR000299FERM domainPROSITEPS50057FERM_3coord: 1644..1956
score: 10.872
IPR029071Ubiquitin-related domainSUPERFAMILY54236Ubiquitin-likecoord: 1640..1734

Blast
[Close]
BLAST of TCONS_00010800-protein vs. Swiss-Prot (Human)
Match: MYO15 (Unconventional myosin-XV OS=Homo sapiens GN=MYO15A PE=1 SV=2)

HSP 1 Score: 370.548 bits (950), Expect = 5.021e-103
Identity = 247/859 (28.75%), Postives = 419/859 (48.78%), Query Frame = 0 
Query: 1142 LLKGSYVSYTNTEWKIHLRKEIFLPKENLGKSLK-EVIYRQILEDISSRTCCRLSGDDRYKVQKV-----IDSGTSMENDILKQKVINAAKE-LPLYFARIYKFEGFNEHLYNYIAISHSGVRL-----AARNSLDETLIVTSYIQYTTIVDLRVENNVLNIVTVEKTIGVHSNKAASMKKLISTYLKAAEKHRRYVKAINNHNSTEFGYLPFKKGNVI---------------------VIYEKE--NVQPGYMW--GVFKNKQGIFPASCVE-----DF-----DTGSVSSAGWLPSIIPIYQKQDIDD--------FMSEDYDQ-------YTLIDFAVRYFKASP--TSDGVRVLNHDQEHPEYKYHSKMVQFSKEPLNGPLINYKNKTWARQAVDVNRGIMKFMGDVRRDQQENDNDLLYFLLKVPVPILPKQESLSGXRDQQENDNDLLYFLLKTGKENLDLTDEILCQLVKQTTFNTSENKESCGRGWKLLLFATSYFDCSSLLYPYLYKYFQSAAEYYK-EFNGAATVCMSNLRRSFEYGGRKEFPSLNELSMMTQGKQCKYQVVYLPGKKEKLCKINTSTTVAVVIKDVCEELGLEMKEEHLEYGLFVYLHDKKVFLPLEEKEYIFDVVIKLEK-DGRKQISLAFRKLVWFQAMRFANNRFTETIYDQVLPDVMNGFLLHHKGNRPSLARDQQIQNEVSLLAALQHRINNKHQAPTLQEVASLIPAIVAPSLKPEQWLEMANEHFILVRHFTAMNARIKFLELLSAWYYFGSSFFFINDCNHSAINEKCVLAVNKNGVHFLSTSKRDTLLSFNFQEILST-SSNTNSDDQKMFVDLRCGDLQNQRVIRIE 1933
            L+  ++  Y +  WKI LRKE+F PK++    ++ ++++RQIL D  S  C R+S D+R +++ +     +D+   +  + +K+ V++ A++   +YF+RI+   G        +A+SH G++L       + +  +  ++ +Y     +       N+L      + + + S +A  +K L+  ++   +K   YV A+ N    +   L F KG++I                     V+Y +E     P + W  G    + G FP+  V+     DF     + G   +A    ++      Q++            S D+ +       YT+++FA +YF+       DG+R+    +E  E +    M+ F+K PL   LI   + + ++ A D+   +M+FMGD                             L G     ++D D+L  LLK   ++  + DE  CQ+VKQ T NTS  ++SC RGW+LL   T+Y  CS +L+P+L ++ Q  +      F G A  C  NL+++  +GGR E PS  EL  M  G+  K Q+  LPG  E+  KI T T    V++++C E+ L   E   EY +FV  +  +   PL  + YI DV  ++E+ DG     L FR+++W Q ++F N  +    Y+QVLPD + G       +RPS    +Q+  +VS LA+LQHR  +    P+++EV   IPA +  +     WL + ++H    +  +   AR +FL LLSA   FGSSFFFI  C++ A+   C+LA+N NG++FLST   + ++ F  +EI ST +    ++    +V++  GD+  QR ++++
Sbjct: 2676 LINPNFYGYQDAPWKIFLRKEVFYPKDSYSHPVQLDLLFRQILHDTLSEACLRISEDERLRMKALFAQNQLDTQKPLVTESVKRAVVSTARDTWEVYFSRIFPATGSVGTGVQLLAVSHVGIKLLRMVKGGQEAGGQLRVLRAYSFADILFVTMPSQNMLEFNLASEKVILFSARAHQVKTLVDDFILELKKDSDYVVAVRNFLPEDPALLAFHKGDIIHLQPLEPPRVGYSAGCVVRRKVVYLEELRRRGPDFGWRFGTIHGRVGRFPSELVQPAAAPDFLQLPTEPGRGRAAAVAAAVASAAAAQEVGRRREGPPVRARSADHGEDALALPPYTMLEFAQKYFRDPQRRPQDGLRL--KSKEPRESRTLEDMLCFTKTPLQESLIELSDSSLSKMATDMFLAVMRFMGDA---------------------------PLKG-----QSDLDVLCNLLKLCGDHEVMRDECYCQVVKQITDNTSSKQDSCQRGWRLLYIVTAYHSCSEVLHPHLTRFLQDVSRTPGLPFQGIAKACEQNLQKTLRFGGRLELPSSIELRAMLAGRSSKRQLFLLPGGLERHLKIKTCTVALDVVEEICAEMALTRPEAFNEYVIFVVTNRGQHVCPLSRRAYILDVASEMEQVDG--GYMLWFRRVLWDQPLKFENELYVTMHYNQVLPDYLKGLFSSVPASRPS----EQLLQQVSKLASLQHRAKDHFYLPSVREVQEYIPAQLYRTTAGSTWLNLVSQHRQQTQALSPHQARAQFLGLLSALPMFGSSFFFIQSCSNIAVPAPCILAINHNGLNFLSTETHELMVKFPLKEIQSTRTQRPTANSSYPYVEIALGDVAAQRTLQLQ 3494

HSP 2 Score: 163.696 bits (413), Expect = 5.495e-40
Identity = 115/311 (36.98%), Postives = 166/311 (53.38%), Query Frame = 0 
Query:    5 VSKLDIPPELAAVFSRLHLWEPLHLDANVCAVSGV-TPWEYCG--IALPADLNTCVFSKFIRLYFQNIDDYKHSKYPIRSSLLRLKNVSSAEAVQVFKLVLRFMEDENMTGVQQYILGNYIINKGIASVDLRDEIYTQLCRQLWKNPQRTSVLRGWLLMGLCLCTFPPTRRMEKYLLKYISDHAFEGYNKFIQKKCI--VWENDELATG--RTYPPTLIEWKALKENALLSLN--CYMADGYSRVIEVDSSSSCEEAARSFLSVRKMEDLDTVGWSFIL-NFQRLSMFAPGSEPMLDLVSILELPPVFPGQ 305
            V  L++P ELA +   L     L L A V  V+ V TP       + LP D+N    +KF++ +F+    +     P+R+ L +L     AEAV +FKL+LRFM D ++ G ++ I GNYI+ KG+A  +LRDEI  QL  Q+W N    +  RGWLL+  CL  F P+    KYLLK++SD+   G+    Q + +  +    +  +G  RT PPT +EW A  E A ++L+  C+  D +S    V S S+ EE A   L  R + D    GW+  + N  + +  A G + +LDLVS LEL   FP Q
Sbjct: 1998 VGHLEVPAELAGL---LQAVAGLGL-AQVPQVAPVRTPRLQAEPRVTLPLDINNYPMAKFVQCHFKE-PAFGMLTVPLRTPLTQLPAEHHAEAVSIFKLILRFMGDPHLHGARENIFGNYIVQKGLAVPELRDEILAQLANQVWHNHNAHNAERGWLLLAACLSGFAPSPCFNKYLLKFVSDYGRNGFQAVCQHRLMQAMGRAQQQGSGAARTLPPTQLEWTATYEKASMALDVGCFNGDQFS--CPVHSWSTGEEVAGDILRHRGLAD-GWRGWTVAMKNGVQWAELA-GHDYVLDLVSDLELLRDFPRQ 2299
The following BLAST results are available for this feature:
BLAST of TCONS_00010800-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MYO155.021e-10328.75Unconventional myosin-XV OS=Homo sapiens GN=MYO15A... [more]
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