TCONS_00010616-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00010616-protein
Unique NameTCONS_00010616-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length605

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00010616-protein ID=TCONS_00010616-protein|Name=TCONS_00010616-protein|organism=Clytia hemisphaerica|type=polypeptide|length=605bp
MEEPSMLKQRPSSSHTQDTSHIIMSTFRDLFSQGGMRQDLIENLSVSKGG
ENVYHDKYVEKLQNIHERWATKITAIDDMIQHLDKAKAQARILELQEEAK
AKKEYAFYQDLGLPSVPSRLNHFLNCKRLRENGLVVPNEFLDYKSEPIAI
EESVEQAIPQYASSTFSSRQQFDKLPKDDNYLPKPEPILPKLSKVGSEDT
KIQTRKSQALASRSEKNVWRKCLPPKQREDEKKEIMKLQQRADFLKNPRF
LSDPRSLVKTFKKDAVATIRHEESYFQANPHPVLFNGYEVGFSYQLKLEL
KNITAASRQLRLIEPKTNYFSLKMGDFPSTNGLVAPGMSCTFTIQFTPET
LEDYNDQIEVKTMGEGSLVIPLQGRRKPPILNLPDEINCGHCLVGDVKTK
DFVVQNTGGLGRFCFINADEVNTTHIDWDQLDYDSKEGLLMTNFIISPRI
FSLQENESVIIKVVFSPEGVKSFLSGIVLLCDNCVKNSHHIIGIGEVADI
ELISVEGGLHEPILGETQDLRAEQIVRFQECYPDVVYTKTLLIKNRIPVP
MDYEWIISPPQVTSNALTINSGDAIETSSPFHIHPSSGVLDEEAEQCFQI
IFSPT
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_005951XLOC_005951Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00010616TCONS_00010616Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013783Ig-like_fold
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 76..105
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 269..377
e-value: 7.1E-12
score: 45.1
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 494..605
e-value: 2.9E-10
score: 39.3
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 378..493
e-value: 1.8E-9
score: 37.3

Blast
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BLAST of TCONS_00010616-protein vs. Swiss-Prot (Human)
Match: DLEC1 (Deleted in lung and esophageal cancer protein 1 OS=Homo sapiens GN=DLEC1 PE=2 SV=2)

HSP 1 Score: 280.026 bits (715), Expect = 2.049e-81
Identity = 194/645 (30.08%), Postives = 323/645 (50.08%), Query Frame = 0 
Query:    3 EPSMLKQRPSSSHTQDTSHIIMSTFRDLFSQGGMRQDLIENLSVSKGGENVYHDKYVEKLQNIHERWATKITAIDDMIQHLDKAKAQARILELQEEAKAKKEYAFYQDL----GLPSVPSRLNHFLNCKRLRENGLVVPNEF----LDYKSEPIAIEESVEQAIPQYASSTFSS------RQQFDKLPKDD------NYLPKPEPILPKLSKVGSEDTKIQTRKSQALASRSEKNVWRKCLPPKQREDEKKEIMKLQQRADFLKNPRFLS-----DPRSLVKTFKKDA----VATIRHEES-----YFQANPHPVLFNGYEVGFSYQLKLELKNITAASRQLRLIEPKTNYFSLKMGDFPSTNGLVAPGMSCTFTIQFTPETLEDYNDQIEVKTMGEGSLVIPLQGRRKPPILNLPDEINCGHCLVGDVKTKDFVVQNTG-GLGRFCFINADEVNTTHIDWDQLDYDSKEGLLMTN---FIISPRIFSLQENESVIIKVVFSPEGVKSFLSGIVLLCDNCVKNSHHIIGIGEVADIELISVEGGLHEPILGETQDLRAEQIVRFQECYPDVVYTKTLLIKNRIPVPMDYEW-IISP---PQVTSNALTINSGDAI-ETSSPFHIHPSSGVLDEEAEQCFQIIFSP 604
            EP +L+ RPSS  TQD SH++   FR+L+S   +  ++  +L  ++G EN  H+++V++LQ I E +  ++   + + +H+   +AQAR +   E   ++   A  QDL     LP V S     ++ + LR++ L+ P ++    + + S P  I      ++P  +  TFS       +++ +K  +D        +  + +  +  L+   +   K +TR+    AS+     W   L   QRE ++  + +++ R  FLKNPRF         +SLV   KK A      +   E+S      F A P    F  YE+G  Y++ + L+N T  SR LR++ P T YF+L +G FP   G+VAPGM+C + +QF P+ L D++D I V+T    +L+IPLQ RR PP+L L   ++CG+CL+G VK   F+ +N G  +GRFC +           W  L + +   +       F I P +F L    +++++V+FSP+ +       +++CDNC       IGIG++  ++LI + G   +P  GE  DL A+  +RF+         K L+I+N   V + + W I+ P   P +     +++S     +  + F I P  GVL    +  F + FSP
Sbjct:   76 EPQLLRLRPSSLRTQDISHLLTGVFRNLYSAEVIGDEVSASLIKARGSENERHEEFVDQLQQIRELYKQRLDEFEMLERHI--TQAQARAIAENERVMSQ---AGVQDLESLVRLPPVKSVSRWCIDSELLRKHHLISPEDYYTDTVPFHSAPKGI------SLPGCSKLTFSCEKRSVQKKELNKKLEDSCRKKLAEFEDELDHTVDSLTWNLTPKAKERTREPLKKASQPRNKNWMNHLRVPQRELDRLLLARMESRNHFLKNPRFFPPNTRYGGKSLVFPPKKPAPIGEFQSTEPEQSCADTPVFLAKPPIGFFTDYEIGPVYEMVIALQNTTTTSRYLRVLPPSTPYFALGLGMFPGKGGMVAPGMTCQYIVQFFPDCLGDFDDFILVETQSAHTLLIPLQARRPPPVLTLSPVLDCGYCLIGGVKMTRFICKNVGFSVGRFCIM-------PKTSWPPLSFKAIATVGFVEQPPFGILPSVFELAPGHAILVEVLFSPKSLGKAEQTFIIMCDNCQIKELVTIGIGQLIALDLIYISGEKSQPDPGELTDLTAQHFIRFEPENLRSTARKQLIIRNATHVELAFYWQIMKPNLQPLMPGETFSMDSIKCYPDKETAFSIMPRKGVLSPHTDHEFILSFSP 702
The following BLAST results are available for this feature:
BLAST of TCONS_00010616-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DLEC12.049e-8130.08Deleted in lung and esophageal cancer protein 1 OS... [more]
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