TCONS_00010542-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00010542-protein
Unique NameTCONS_00010542-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length214

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00010542-protein ID=TCONS_00010542-protein|Name=TCONS_00010542-protein|organism=Clytia hemisphaerica|type=polypeptide|length=214bp
MSATRSLQSAKQALRKDLKARLRKMTKEERINQSKTIFEKLTSTEVFKKS
RTLSLYLSMSSEVHTNDILMHCFDTGKKCYIPHYTEDYMKMVFIKDKADY
DSLPLTAWNIKQPADYDSLPLTAWNIKQPADDDDQRLDIMDKGNLDLIIV
PGLGFTRSGLRLGRGKGYYDNYFRKYEEKFGQKPYLIGLAYSCQMVEDLP
ADQFDIPLDQVLFP
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_005911XLOC_005911Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00010542TCONS_00010542Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002698FTHF_cligase
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR0026985-formyltetrahydrofolate cyclo-ligasePFAMPF018125-FTHF_cyc-ligcoord: 11..213
e-value: 1.5E-47
score: 161.8
IPR0026985-formyltetrahydrofolate cyclo-ligaseTIGRFAMTIGR02727TIGR02727coord: 11..212
e-value: 1.6E-38
score: 130.4
IPR0026985-formyltetrahydrofolate cyclo-ligasePIRSFPIRSF0068065_FTHFcoord: 6..214
e-value: 1.0E-43
score: 147.3
NoneNo IPR availableGENE3D3.40.50.10420coord: 2..214
e-value: 4.3E-54
score: 182.9
NoneNo IPR availableSUPERFAMILY100950NagB/RpiA/CoA transferase-likecoord: 11..213

Blast
[Close]
BLAST of TCONS_00010542-protein vs. Swiss-Prot (Human)
Match: MTHFS (5-formyltetrahydrofolate cyclo-ligase OS=Homo sapiens GN=MTHFS PE=1 SV=2)

HSP 1 Score: 159.844 bits (403), Expect = 1.696e-49
Identity = 81/213 (38.03%), Postives = 126/213 (59.15%), Query Frame = 0 
Query:    3 ATRSLQSAKQALRKDLKARLRKMTKEERINQSKTIFEKLTSTEVFKKSRTLSLYLSMSSEVHTNDILMHCFDTGKKCYIPHY--TEDYMKMVFIKDKADYDSLPLTAWNIKQPADYDSLPLTAWNIKQPADDDDQRLDIMDKGNLDLIIVPGLGFTRSGLRLGRGKGYYDNYFRKYEEKFGQKPYLIGLAYSCQMVEDLPADQFDIPLDQVLF 213
            A  ++ SAK++LR +LK RLR M+ EER+ QS+ + +K+ +   ++KS+ +S++LSM  E+ T +I+   F  GK C+IP Y    ++M MV I+   +   LP T+WNI QP                  + D R + +  G LDLI +PGLGF + G RLGRGKGYYD Y ++  +    KPY + LA+  Q+   +P ++ D+ +D+VL+
Sbjct:    2 AAAAVSSAKRSLRGELKQRLRAMSAEERLRQSRVLSQKVIAHSEYQKSKRISIFLSMQDEIETEEIIKDIFQRGKICFIPRYRFQSNHMDMVRIESPEEISLLPKTSWNIPQPG-----------------EGDVREEALSTGGLDLIFMPGLGFDKHGNRLGRGKGYYDAYLKRCLQHQEVKPYTLALAFKEQICLQVPVNENDMKVDEVLY 197
The following BLAST results are available for this feature:
BLAST of TCONS_00010542-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MTHFS1.696e-4938.035-formyltetrahydrofolate cyclo-ligase OS=Homo sapi... [more]
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