TCONS_00010481-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00010481-protein
Unique NameTCONS_00010481-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length698

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00010481-protein ID=TCONS_00010481-protein|Name=TCONS_00010481-protein|organism=Clytia hemisphaerica|type=polypeptide|length=698bp
MSRNNLSNSEFPLLLEKMSEKCSPPDLDNLLRLDPYLNDFKTDIANRYAS
FHETLEQINQNEGGLDKFSASYKNFGLVVQKDGILCREWIPDVVNVWLYG
DFNEWNRTSHKFERKDFGKWELFIPLTSDGKHPIHHASKYKLLVEVVQGN
IVERLSPWASYVLQDNQTKLYEASFWNPVTPFSFNNARPKKPRSLRIYES
HVGIASAEYGIATYSQFKTNLLPYIKDLGYNAIQLMAIMEHAYYASFGYQ
VTSFFAASSRYGTPDELKELIDEAHRLGLVVLLDVVHSHASKNVADGLNQ
FNGTNGCFFHDNTRGFHSLWDSRLFNYKDWEVLRFLLSNLRWYMDEYQFD
GFRFDGVTSMLYHHHGIGTGFSGGYHEYFSMNADVEAVNYLQLANHMLHE
LYPDVITIAEDVSGMPALCRPVNEGGLGFDYRLAMALPDMWIKILKEQKD
EDWDIGNIVHTLENRRYKEKNICYAESHDQALVGDKTLAFWLMDKEMYTQ
MSTLQPMNAIVDRGMALHKMIRLLTCALGGEGYLTFMGNEFGHPEWLDFP
REGNQDSYHYARRQYNLVQDPILRFGQLKEFEKKMLMVDDKHQFLPADPG
FVTCKNGGDKTIAFERAGLIFCFNFHHDKSFPGYPVGTNLPGKYKIMLDS
DNKDFGGHGRLDPQCHYLTEQKSFNGREHCLTVYLPSRTAIILAKVSD
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_005869XLOC_005869Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00010481TCONS_00010481Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006047Glyco_hydro_13_cat_dom
IPR006048A-amylase/branching_C
IPR004193Glyco_hydro_13_N
IPR013783Ig-like_fold
IPR006407GlgB
IPR014756Ig_E-set
IPR017853Glycoside_hydrolase_SF
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
GO:0005978glycogen biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0043169cation binding
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:00038441,4-alpha-glucan branching enzyme activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0005975 carbohydrate metabolic process
biological_process GO:0005978 glycogen biosynthetic process
molecular_function GO:0003844 1,4-alpha-glucan branching enzyme activity
molecular_function GO:0003824 catalytic activity
molecular_function GO:0043169 cation binding
molecular_function GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006047Glycosyl hydrolase, family 13, catalytic domainSMARTSM00642aamycoord: 178..562
e-value: 3.5E-8
score: 10.8
IPR006047Glycosyl hydrolase, family 13, catalytic domainPFAMPF00128Alpha-amylasecoord: 220..299
e-value: 8.2E-15
score: 55.1
NoneNo IPR availableGENE3D2.60.40.1180coord: 599..698
e-value: 4.2E-29
score: 100.1
NoneNo IPR availableGENE3D3.20.20.80coord: 185..598
e-value: 8.7E-73
score: 245.2
NoneNo IPR availableCDDcd02854E_set_GBE_euk_Ncoord: 81..176
e-value: 5.90549E-38
score: 135.738
NoneNo IPR availableCDDcd11321AmyAc_bac_euk_BEcoord: 178..583
e-value: 0.0
score: 823.404
NoneNo IPR availableSUPERFAMILY51011Glycosyl hydrolase domaincoord: 600..695
IPR006048Alpha-amylase/branching enzyme, C-terminal all betaPFAMPF02806Alpha-amylase_Ccoord: 602..695
e-value: 3.0E-23
score: 82.0
IPR004193Glycoside hydrolase, family 13, N-terminalPFAMPF02922CBM_48coord: 75..159
e-value: 1.5E-11
score: 44.4
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 70..181
e-value: 2.5E-18
score: 65.8
IPR0064071,4-alpha-glucan-branching enzyme, GlgBPIRSFPIRSF000463GlgBcoord: 10..698
e-value: 6.5E-194
score: 644.2
IPR014756Immunoglobulin E-setSUPERFAMILY81296E set domainscoord: 68..168
IPR017853Glycoside hydrolase superfamilySUPERFAMILY51445(Trans)glycosidasescoord: 185..588

Blast
[Close]
BLAST of TCONS_00010481-protein vs. Swiss-Prot (Human)
Match: GLGB (1,4-alpha-glucan-branching enzyme OS=Homo sapiens GN=GBE1 PE=1 SV=3)

HSP 1 Score: 865.914 bits (2236), Expect = 0.000e+0
Identity = 407/673 (60.48%), Postives = 510/673 (75.78%), Query Frame = 0 
Query:   25 PDLDNLLRLDPYLNDFKTDIANRYASFHETLEQINQNEGGLDKFSASYKNFGLVVQKDGIL-CREWIPDVVNVWLYGDFNEWNRTSHKFERKDFGKWELFIPLTSDGKHPIHHASKYKLLVEVVQGNIVERLSPWASYVLQDNQTKLYEASFWNPVTPFSFNNARPKKPRSLRIYESHVGIASAEYGIATYSQFKTNLLPYIKDLGYNAIQLMAIMEHAYYASFGYQVTSFFAASSRYGTPDELKELIDEAHRLGLVVLLDVVHSHASKNVADGLNQFNGTNGCFFHDNTRGFHSLWDSRLFNYKDWEVLRFLLSNLRWYMDEYQFDGFRFDGVTSMLYHHHGIGTGFSGGYHEYFSMNADVEAVNYLQLANHMLHELYPDVITIAEDVSGMPALCRPVNEGGLGFDYRLAMALPDMWIKILKEQKDEDWDIGNIVHTLENRRYKEKNICYAESHDQALVGDKTLAFWLMDKEMYTQMSTLQPMNAIVDRGMALHKMIRLLTCALGGEGYLTFMGNEFGHPEWLDFPREGNQDSYHYARRQYNLVQDPILRFGQLKEFEKKMLMVDDKHQFLPADPGFVTCKNGGDKTIAFERAGLIFCFNFHHDKSFPGYPVGTNLPGKYKIMLDSDNKDFGGHGRLDPQCHYLTEQKSFNGREHCLTVYLPSRTAIILAKV 696
            P+L  LL +DPYL  +  D   RY  F + L+ I +NEGG+DKFS  Y++FG+    DG L C+EW P    V+L GDFN WN  S+ +++ D+GKWEL+IP   +    + H SK K+++    G I+ R+SPWA YV+++     Y+   W+P   + F ++RPKKPRSLRIYESHVGI+S E  +A+Y  F  N+LP IK LGYN IQLMAIMEHAYYASFGYQ+TSFFAASSRYGTP+EL+EL+D AH +G++VLLDVVHSHASKN ADGLN F+GT+ C+FH   RG H LWDSRLF Y  WE+LRFLLSN+RW+++EY+FDGFRFDGVTSMLYHHHG+G GFSG Y EYF +  D +A+ YL LANH++H L PD ITIAEDVSGMPALC P+++GG GFDYRLAMA+PD WI++LKE KDEDW++G+IV+TL NRRY EK I YAESHDQALVGDK+LAFWLMD EMYT MS L P   ++DRG+ LHKMIRL+T  LGGEGYL FMGNEFGHPEWLDFPR+GN +SYHYARRQ++L  D +LR+  L  F++ M  +++++ +L A   +V+ K+ G+K IAFERAGL+F FNFH  KS+  Y VGT LPGK+KI+LDSD  ++GGH RLD    + +E    NGR + L VY+PSR A+IL  V
Sbjct:   26 PELARLLEIDPYLKPYAVDFQRRYKQFSQILKNIGENEGGIDKFSRGYESFGVHRCADGGLYCKEWAPGAEGVFLTGDFNGWNPFSYPYKKLDYGKWELYIPPKQNKSVLVPHGSKLKVVITSKSGEILYRISPWAKYVVREGDNVNYDWIHWDPEHSYEFKHSRPKKPRSLRIYESHVGISSHEGKVASYKHFTCNVLPRIKGLGYNCIQLMAIMEHAYYASFGYQITSFFAASSRYGTPEELQELVDTAHSMGIIVLLDVVHSHASKNSADGLNMFDGTDSCYFHSGPRGTHDLWDSRLFAYSSWEILRFLLSNIRWWLEEYRFDGFRFDGVTSMLYHHHGVGQGFSGDYSEYFGLQVDEDALTYLMLANHLVHTLCPDSITIAEDVSGMPALCSPISQGGGGFDYRLAMAIPDKWIQLLKEFKDEDWNMGDIVYTLTNRRYLEKCIAYAESHDQALVGDKSLAFWLMDAEMYTNMSVLTPFTPVIDRGIQLHKMIRLITHGLGGEGYLNFMGNEFGHPEWLDFPRKGNNESYHYARRQFHLTDDDLLRYKFLNNFDRDMNRLEERYGWLAAPQAYVSEKHEGNKIIAFERAGLLFIFNFHPSKSYTDYRVGTALPGKFKIVLDSDAAEYGGHQRLDHSTDFFSEAFEHNGRPYSLLVYIPSRVALILQNV 698
The following BLAST results are available for this feature:
BLAST of TCONS_00010481-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GLGB0.000e+060.481,4-alpha-glucan-branching enzyme OS=Homo sapiens ... [more]
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