TCONS_00010324-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00010324-protein
Unique NameTCONS_00010324-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length276

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00010324-protein ID=TCONS_00010324-protein|Name=TCONS_00010324-protein|organism=Clytia hemisphaerica|type=polypeptide|length=276bp
MAQSGEAPKPNFCQRFSAQCSSFGKFLYNGETGEVMGRSGNSWAKIGFFY
LVFYGFLAGFFSAMLAVFMTTIEKPEDGGRPKLTQFIANKPGITTLGKLS
LLDGYDANSTTSDYAEGIQKYFEEMKNNSLYKGECPIGRNETFEKPCYAP
SSIYGDCAPEADLSTSMFGVKDEKPCVFIRINRVREWVPEETGKYLKLEC
SGTGFSKQWPEGFLMNGFPYMGGNYELPWVAVQLDATVKGLKVRCELKGK
GISVSDSFNTARSYGKIQITDVSVKN
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_005793XLOC_005793Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00010324TCONS_00010324Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000402Na/K_ATPase_sub_beta
Vocabulary: Biological Process
TermDefinition
GO:0006813potassium ion transport
GO:0006814sodium ion transport
Vocabulary: Cellular Component
TermDefinition
GO:0005890sodium:potassium-exchanging ATPase complex
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006813 potassium ion transport
biological_process GO:0006814 sodium ion transport
cellular_component GO:0005890 sodium:potassium-exchanging ATPase complex
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.5.170coord: 40..82
e-value: 9.5E-16
score: 56.8
NoneNo IPR availableGENE3D2.60.40.1660coord: 83..271
e-value: 1.3E-14
score: 53.9
IPR000402Sodium/potassium-transporting ATPase subunit betaPFAMPF00287Na_K-ATPasecoord: 17..258
e-value: 1.1E-37
score: 129.6

Blast
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BLAST of TCONS_00010324-protein vs. Swiss-Prot (Human)
Match: AT1B2 (Sodium/potassium-transporting ATPase subunit beta-2 OS=Homo sapiens GN=ATP1B2 PE=1 SV=3)

HSP 1 Score: 83.5741 bits (205), Expect = 1.048e-18
Identity = 78/262 (29.77%), Postives = 118/262 (45.04%), Query Frame = 0 
Query:   25 KFLYNGETGEVMGRSGNSWAKIGFFYLVFYGFLAGFFSAMLAVFMTTIEKPEDGGRPKLTQFIANKPGITTLGKLSLLDGYDANSTTSDYAEGIQKY--FEEMKNNSLYKGECPIGR-NETFEKP-----------CYAPSSIYGDCAPEADLSTSMFGVKDEKPCVFIRINRVREWVPEETGKYLKLECSGTGFSKQWPEG-FLM---NG------FPYMGG----NYELPWVAVQ-LDATVK-GLKVRCELKGKGISVSD 256
            +F++N  T + MGR+G SWA I  FYLVFYGFL   F+  + V + T+        PK    +A  PG+    K   LD     S T  + + +QK   F E  N+S+   +  + R    +E+P           C    +  G+C+   D  ++ +G    +PCVFI++NRV  +      + + + C+G         G F+M   NG      FPY G     NY  P VAV+ L+ T    + V C +    I+  D
Sbjct:   19 EFVWNPRTHQFMGRTGTSWAFILLFYLVFYGFLTAMFTLTMWVMLQTVS----DHTPKYQDRLAT-PGLMIRPKTENLDVIVNVSDTESWDQHVQKLNKFLEPYNDSIQAQKNDVCRPGRYYEQPDNGVLNYPKRACQFNRTQLGNCSGIGD--STHYGYSTGQPCVFIKMNRVINFYA-GANQSMNVTCAGKRDEDAENLGNFVMFPANGNIDLMYFPYYGKKFHVNYTQPLVAVKFLNVTPNVEVNVECRINAANIATDD 272
The following BLAST results are available for this feature:
BLAST of TCONS_00010324-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
AT1B21.048e-1829.77Sodium/potassium-transporting ATPase subunit beta-... [more]
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