TCONS_00010304-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00010304-protein
Unique Name	TCONS_00010304-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	521

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00010304-protein ID=TCONS_00010304-protein|Name=TCONS_00010304-protein|organism=Clytia hemisphaerica|type=polypeptide|length=521bp
MNVFSKFGETLHSVDAHALLKSIGLEQMMSDAPTDHKYLAYLSGGILASA
AVLFVGNRLFHDRLSSWNLPGPKSSLLPIDLFKGHKNQHQLHLLLDDYVK
TYGETFAFNYKGQPVVATTDEDIIHKILWKEFPNFENRKFFVEMPWPCQH
MVTMAKGAKAKMIRNLLKAVLDAKSIKNNWAHFQEANQDVEELLRDAALN
MLEVNSTSLANGYIMQIITKMAFSLDCSNQSDLNKQLVQLSHLFTRPPTW
LQSCSSLPIIGNLLKLSPWGFNSSLHQFIKIATDIVVERRKEKNREPQDV
LDVLLAAQSKDSNISTEILLAQAIVLLTVVHASTATTISIATYYIAKHKD
VQRRLQQEIDSISMEDGFPSWEHLHKQLPYLGQVVNETLRLYPSAFMLMR
ECTKPTTVNGISFEKGDGVLIPTYSMHRDPKVFTDPEQFNPDRFETKPSR
HYYPFGDGYRMCPGKEMALSEIKTYLASMLKNFDLSLVDENQELCVKSYI
SAQTTMAVDEPIQIRVQKRRH

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_005784	XLOC_005784	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00010304	TCONS_00010304	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002401	Cyt_P450_E_grp-I
IPR001128	Cyt_P450
IPR017972	Cyt_P450_CS

Vocabulary: **Molecular Function**
Term	Definition
GO:0005506	iron ion binding
GO:0020037	heme binding
GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

Vocabulary: **Biological Process**
Term	Definition
GO:0055114	oxidation-reduction process

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055114	oxidation-reduction process
molecular_function	GO:0020037	heme binding
molecular_function	GO:0005506	iron ion binding
molecular_function	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002401	Cytochrome P450, E-class, group I	PRINTS	PR00463	EP450I	coord: 338..364 score: 25.33 coord: 462..485 score: 31.27 coord: 99..118 score: 25.04 coord: 422..446 score: 34.74 coord: 452..462 score: 48.91
IPR001128	Cytochrome P450	PRINTS	PR00385	P450	coord: 329..346 score: 20.39 coord: 462..473 score: 37.53 coord: 383..394 score: 44.06 coord: 453..462 score: 53.34
IPR001128	Cytochrome P450	PFAM	PF00067	p450	coord: 81..493 e-value: 1.1E-74 score: 251.8
IPR001128	Cytochrome P450	SUPERFAMILY	48264	Cytochrome P450	coord: 68..519
None	No IPR available	GENE3D	1.10.630.10		coord: 53..521 e-value: 4.4E-100 score: 335.0
IPR017972	Cytochrome P450, conserved site	PROSITE	PS00086	CYTOCHROME_P450	coord: 455..464

Blast

[Close]

BLAST of TCONS_00010304-protein vs. Swiss-Prot (Human)
Match: CP3A4 (Cytochrome P450 3A4 OS=Homo sapiens GN=CYP3A4 PE=1 SV=4)

HSP 1 Score: 182.57 bits (462), Expect = 2.391e-51
Identity = 137/478 (28.66%), Postives = 238/478 (49.79%), Query Frame = 0

Query:   61 HDRLSSWNLPGPKSSLLPIDLFKGHKNQHQLHLLLD-DYVKTYGETFAFNYKGQPVVATTDEDIIHKILWKE-FPNFENRKFFVEMPWPCQHMVTMAKGAKAKMIRNLLKAVLDAKSIKNNWAHFQEANQDVEELLRDAALNMLEVNSTSLANGYIMQIITKMAFSLDCSNQSDLNKQLVQ-----LSHLFTRPPTWLQSCSSLPIIGNLLK-LSPWGFNSSLHQFIKIATDIVVERRKEKNREPQ-DVLDVLLAAQ-SKDSN----ISTEILLAQAIVLLTVVHASTATTISIATYYIAKHKDVQRRLQQEIDSISMEDGFPSWEHLHKQLPYLGQVVNETLRLYPSAFMLMRECTKPTTVNGISFEKGDGVLIPTYSMHRDPKVFTDPEQFNPDRFETKPSRH-----YYPFGDGYRMCPGKEMALSEIKTYLASMLKNFDLSLVDENQELCVKSYISAQTTMAVDEPIQIRVQKR 519
            H       +PGP     P+       + H+   + D +  K YG+ + F    QPV+A TD D+I  +L KE +  F NR+ F  + +  +  +++A+  + K +R+LL     +  +K       +    +   LR  A     V    +   Y M +IT  +F ++  + ++     V+     L   F  P  +  S +  P +  +L+ L+   F   +  F++ +   + E R E  ++ + D L +++ +Q SK++     +S   L+AQ+I+ +   + +T++ +S   Y +A H DVQ++LQ+EID++      P+++ +  Q+ YL  VVNETLRL+P A  L R C K   +NG+   KG  V+IP+Y++HRDPK +T+PE+F P+RF  K   +     Y PFG G R C G   AL  +K  L  +L+NF      E Q   +   +S    +  ++P+ ++V+ R
Sbjct:   30 HGLFKKLGIPGPT----PLPFLGNILSYHKGFCMFDMECHKKYGKVWGFYDGQQPVLAITDPDMIKTVLVKECYSVFTNRRPFGPVGF-MKSAISIAEDEEWKRLRSLLSPTFTSGKLKEMVPIIAQYGDVLVRNLRREAETGKPVTLKDVFGAYSMDVITSTSFGVNIDSLNNPQDPFVENTKKLLRFDFLDP--FFLSITVFPFLIPILEVLNICVFPREVTNFLRKSVKRMKESRLEDTQKHRVDFLQLMIDSQNSKETESHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPPTYDTVL-QMEYLDMVVNETLRLFPIAMRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNKDNIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSFKPCKETQ---IPLKLSLGGLLQPEKPVVLKVESR 496

The following BLAST results are available for this feature:

BLAST of TCONS_00010304-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00010304-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
CP3A4	2.391e-51	28.66	Cytochrome P450 3A4 OS=Homo sapiens GN=CYP3A4 PE=1...	[more]

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TCONS_00010304-protein (polypeptide) - C. hemisphaerica