TCONS_00009856-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00009856-protein
Unique NameTCONS_00009856-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length168

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00009856-protein ID=TCONS_00009856-protein|Name=TCONS_00009856-protein|organism=Clytia hemisphaerica|type=polypeptide|length=168bp
MCYVPKRYVLSGLIHFATFCLYSLRVNLSVAIVSMVNQTYANAKKTSLIE
CGTGNTTIAITQEDGEFLWDQNRQGLILGAFFYGYLITQVPGGWLANRYG
GKWVYAVGMLFCNIMTALTPVAARTSYMFLIAARVIEGLGQVRNHHILFF
HIKSNDVFYNYFQQSSLD
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_005512XLOC_005512Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00009856TCONS_00009856Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027378Nucleotide_channel_N
IPR011701MFS
IPR020846MFS_dom
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055085 transmembrane transport
cellular_component GO:0016021 integral component of membrane
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027378Cyclic nucleotide-regulated ion channel, N-terminal domainGENE3D1.20.120.540coord: 14..143
e-value: 8.3E-26
score: 89.8
IPR011701Major facilitator superfamilyPFAMPF07690MFS_1coord: 16..141
e-value: 4.3E-15
score: 55.4
IPR020846Major facilitator superfamily domainPROSITEPS50850MFScoord: 31..168
score: 10.718
IPR020846Major facilitator superfamily domainCDDcd06174MFScoord: 52..141
e-value: 6.3391E-10
score: 54.2421
IPR020846Major facilitator superfamily domainSUPERFAMILY103473MFS general substrate transportercoord: 6..37
coord: 66..141

Blast
[Close]
BLAST of TCONS_00009856-protein vs. Swiss-Prot (Human)
Match: S17A5 (Sialin OS=Homo sapiens GN=SLC17A5 PE=1 SV=2)

HSP 1 Score: 106.301 bits (264), Expect = 2.166e-27
Identity = 57/137 (41.61%), Postives = 81/137 (59.12%), Query Frame = 0 
Query:    7 RYVLSGLIHFATFCLYSLRVNLSVAIVSMVNQTYANAKKTSLIECGTGNTTIAI--TQEDGEFLWDQNRQGLILGAFFYGYLITQVPGGWLANRYGGKWVYAVGMLFCNIMTALTPVAARTSYMFLIAARVIEGLGQ 141
            RY L+ L  F  F +Y+LRVNLSVA+V MV+         +   C   +  I +   Q   ++ WD   QG ILG+FFYGY+ITQ+PGG++A++ GGK +   G+L   ++T  TP+AA      LI  R +EGLG+
Sbjct:   39 RYNLAILAFFGFFIVYALRVNLSVALVDMVDSNTTLEDNRTSKACPEHSAPIKVHHNQTGKKYQWDAETQGWILGSFFYGYIITQIPGGYVASKIGGKMLLGFGILGTAVLTLFTPIAADLGVGPLIVLRALEGLGE 175
The following BLAST results are available for this feature:
BLAST of TCONS_00009856-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
S17A52.166e-2741.61Sialin OS=Homo sapiens GN=SLC17A5 PE=1 SV=2[more]
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