TCONS_00009792-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00009792-protein
Unique NameTCONS_00009792-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length359

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00009792-protein ID=TCONS_00009792-protein|Name=TCONS_00009792-protein|organism=Clytia hemisphaerica|type=polypeptide|length=359bp
MNLTIAWWTGKRIGVLLARPSVLSMKNQYVCKRNQSTMLAEVGRFETPKV
QGKYEAGQLFLHRVFGYRGVILYPWIAKFYDLDSITDGKDKPILEETPQN
EKKNTKETAMKPSSSTYYQVLIDERDYPHIWTTFPSYNFRFYHPQRAQSE
AVTFLGNPEDTTLYAVPGLDYVNHTDILPYISSSEQPIEHDLFKKFLLPN
QDQVPAFTASPSLRTWHQKNHKWLELSEVIRETTDNIRVTAIPFYMGSRM
VHGAKSYWWRYSIRLENMGMESVQLKERHWRIFCLSGVLDSVKGRGVVGQ
EPVLSTRQPAFQYSSHVTLPSPSGHMWGTYRLERPDGRVFDVRIPSFPLE
SKEDDPITT
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_005482XLOC_005482Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00009792TCONS_00009792Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011722Hemimethylated_DNA-bd_dom
IPR007474ApaG_domain
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003677 DNA binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011722Hemimethylated DNA-binding domainSMARTSM00992YccV_like_2_acoord: 51..206
e-value: 2.5E-22
score: 90.2
IPR011722Hemimethylated DNA-binding domainPFAMPF08755YccV-likecoord: 53..196
e-value: 5.5E-10
score: 39.5
IPR011722Hemimethylated DNA-binding domainGENE3D2.30.30.390coord: 49..209
e-value: 8.4E-24
score: 83.1
IPR011722Hemimethylated DNA-binding domainSUPERFAMILY141255YccV-likecoord: 53..139
IPR007474ApaG domainPFAMPF04379DUF525coord: 254..333
e-value: 6.6E-27
score: 93.5
IPR007474ApaG domainGENE3D2.60.40.1470coord: 230..354
e-value: 3.9E-39
score: 133.1
IPR007474ApaG domainPROSITEPS51087APAGcoord: 231..356
score: 34.867
IPR007474ApaG domainSUPERFAMILY110069ApaG-likecoord: 233..350
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 90..109

Blast
[Close]
BLAST of TCONS_00009792-protein vs. Swiss-Prot (Human)
Match: PDIP2 (Polymerase delta-interacting protein 2 OS=Homo sapiens GN=POLDIP2 PE=1 SV=1)

HSP 1 Score: 380.178 bits (975), Expect = 1.815e-131
Identity = 190/339 (56.05%), Postives = 237/339 (69.91%), Query Frame = 0 
Query:   20 PSVLSMKNQYVCKRN--QSTMLAEVGRFETPKVQGKYEAGQLFLHRVFGYRGVILYPWIAKFYDLDSITDGKDKPILEETPQNEKKNTKETAMKPSSSTYYQVLIDERDYPHIWTTFPSYNFRFYHPQRAQSEAVTFLGNPEDT-TLYAVPGLDYVNHTDILPYISSSEQPIEHDLFKKFLLPNQDQVPAFTASPSLRTWHQKNHKWLELSEVIRETTDNIRVTAIPFYMGSRMVHGAKSYWWRYSIRLENMGMESVQLKERHWRIFCLSGVLDSVKGRGVVGQEPVLSTRQPAFQYSSHVTLPSPSGHMWGTYRLERPDGRVFDVRIPSFPLESKEDD 355
            P+  +   +++  RN  +  +L  VG FE PK  GKYE GQLFLH +FGYRGV+L+PW A+ YD D  +   +K    E P      +KE  +K  + TYYQVLID RD PHI              QR+Q+EAVTFL N +D+  LYA+PGLDYV+H DILPY S+ + PI+H+LF++FLL +Q + P F A  +LR W +KNH WLELS+V RETT+NIRVT IPFYMG R    +  YWWRY IRLEN+  + VQL+ERHWRIF LSG L++V+GRGVVG+EPVLS  QPAFQYSSHV+L + SGHMWGT+R ERPDG  FDVRIP F LES +D+
Sbjct:   41 PASTTTTRRHLSSRNRPEGKVLETVGVFEVPKQNGKYETGQLFLHSIFGYRGVVLFPWQARLYDRDVASAAPEK---AENPAGH--GSKE--VKGKTHTYYQVLIDARDCPHI-------------SQRSQTEAVTFLANHDDSRALYAIPGLDYVSHEDILPYTSTDQVPIQHELFERFLLYDQTKAPPFVARETLRAWQEKNHPWLELSDVHRETTENIRVTVIPFYMGMREAQNSHVYWWRYCIRLENLDSDVVQLRERHWRIFSLSGTLETVRGRGVVGREPVLSKEQPAFQYSSHVSLQASSGHMWGTFRFERPDGSHFDVRIPPFSLESNKDE 359
The following BLAST results are available for this feature:
BLAST of TCONS_00009792-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PDIP21.815e-13156.05Polymerase delta-interacting protein 2 OS=Homo sap... [more]
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