TCONS_00009735-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00009735-protein
Unique Name	TCONS_00009735-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	515

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00009735-protein ID=TCONS_00009735-protein|Name=TCONS_00009735-protein|organism=Clytia hemisphaerica|type=polypeptide|length=515bp
MADKAQLEVEKKAKAAAKAERKKQYEAQQAEKAKQQGGDAAGKKSKAELK
AERRAKQEAQRAAKTTGDSAKSGKKSLGDNVGKKGQGDNLGKKKPLTEKQ
SEKSQQQESKIKKQPSSSSITKSHEQPRVSSNVQMDSEKVQKKITKTLAK
QNVPQRSAAQKKVQMFAHLHQYEKDRSLTKNLSFSSCSIHPAIIKLGLQF
AEGIITGSNARCISMLCALKMVIKDYSTPPQKELSRDLESKIKPCISFLT
QCRNLSQSMGNAIKYLKHQITNLSPELPEAKAKEHLLESIDSFIQERIIL
ADQQITNFAVQKIHDGNKILIYGFSSLIINILKDAKESGKEFEVVVVDCR
PDFPGRETLKRLEDAEIKCSYTLLNNISYIIKEVTTVFLGTHALLANGNV
MAKAGTSMVAMVAKSNNVPVLVCCETYKFCERAQSDSFVFNELGDPDDLV
SLHRPHSQDILTNWRDIKSLYLLNLVYDVTPSSFVDMVVTEIGMIPCTSV
PVVLRVKNTNDGIAT

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_005446	XLOC_005446	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00009735	TCONS_00009735	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000649	IF-2B-related

Vocabulary: **Biological Process**
Term	Definition
GO:0044237	cellular metabolic process

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0044237	cellular metabolic process

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 2..36
None	No IPR available	GENE3D	3.40.50.10470		coord: 299..514 e-value: 6.2E-64 score: 214.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..139
None	No IPR available	SUPERFAMILY	100950	NagB/RpiA/CoA transferase-like	coord: 188..505
IPR000649	Initiation factor 2B-related	PFAM	PF01008	IF-2B	coord: 205..496 e-value: 2.5E-81 score: 272.9

Blast

[Close]

BLAST of TCONS_00009735-protein vs. Swiss-Prot (Human)
Match: EI2BD (Translation initiation factor eIF-2B subunit delta OS=Homo sapiens GN=EIF2B4 PE=1 SV=2)

HSP 1 Score: 449.129 bits (1154), Expect = 8.475e-154
Identity = 229/467 (49.04%), Postives = 312/467 (66.81%), Query Frame = 0

Query:   44 KSKAELKAERRAKQEAQRAAKTTGDSAKSGKKSLGDNVGKKGQGDNLGKKKPLTEKQSEKSQQQESKIKKQPSSSSITKSHEQPRVSSNVQMDSEKVQKKITKTLAKQNVPQRSAAQKKVQMFAHLHQYEKDRSLTKNLSFSSCSIHPAIIKLGLQFAEGIITGSNARCISMLCALKMVIKDYSTPPQKELSRDLESKIKPCISFLTQCRNLSQSMGNAIKYLKHQITNLSPELPEAKAKEHLLESIDSFIQERIILADQQITNFAVQKIHDGNKILIYGFSSLIINILKDAKESGKEFEVVVVDCRPDFPGRETLKRLEDAEIKCSYTLLNNISYIIKEVTTVFLGTHALLANGNVMAKAGTSMVAMVAKSNNVPVLVCCETYKFCERAQSDSFVFNELGDPDDLVSLHRPHSQDILTNWRDIKSLYLLNLVYDVTPSSFVDMVVTEIGMIPCTSVPVVLRVKNTN 510
            +SKAEL+AERRAKQEA+RA K                                   Q+ K +Q     K  PS++  T S  + R+    Q+D + + +++ K   +Q VP R     KV +F+HL QY +  SLT+ +S  S  IHPA+++LGLQ+++G+++GSNARCI++L AL+ VI+DY+TPP +ELSRDL +K+KP +SFLTQCR LS SM NAIK+L  +IT++     E +AK  L  +ID ++QE+I+LA Q I+ FA QKI +G+ IL+YG SSL+  IL++A   G+ F VVVVD RP   GR TL+ L  A +  SY L+   SY++ EV+ V LG HALLANG+VM++ GT+ +A+VA+++NVPVLVCCETYKFCER Q+D+FV NEL DPDDL      H    L NW++  SL LLNLVYDVTP   VD+V+TE+GMIPC+SVPVVLRVK+++
Sbjct:   95 RSKAELRAERRAKQEAERALK-----------------------------------QARKGEQGGPPPKASPSTAGETPSGVK-RLPEYPQVD-DLLLRRLVKKPERQQVPTRKDYGSKVSLFSHLPQYSRQNSLTQFMSIPSSVIHPAMVRLGLQYSQGLVSGSNARCIALLRALQQVIQDYTTPPNEELSRDLVNKLKPYMSFLTQCRPLSASMHNAIKFLNKEITSVGSSKREEEAKSELRAAIDRYVQEKIVLAAQAISRFAYQKISNGDVILVYGCSSLVSRILQEAWTEGRRFRVVVVDSRPWLEGRHTLRSLVHAGVPASYLLIPAASYVLPEVSKVLLGAHALLANGSVMSRVGTAQLALVARAHNVPVLVCCETYKFCERVQTDAFVSNELDDPDDLQCKRGEHVA--LANWQNHASLRLLNLVYDVTPPELVDLVITELGMIPCSSVPVVLRVKSSD 522

The following BLAST results are available for this feature:

BLAST of TCONS_00009735-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00009735-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
EI2BD	8.475e-154	49.04	Translation initiation factor eIF-2B subunit delta...	[more]

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TCONS_00009735-protein (polypeptide) - C. hemisphaerica