TCONS_00009417-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00009417-protein
Unique NameTCONS_00009417-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length140

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00009417-protein ID=TCONS_00009417-protein|Name=TCONS_00009417-protein|organism=Clytia hemisphaerica|type=polypeptide|length=140bp
MTTNETTAVLHKGSCHCGKIRFEVEAPEKITCVTCNCSICNKKQNHHFIV
PRSKFRLLEGADFITTYTFNTHMAKHTFCKVCGVQSFYTPRSNPDGVGVM
PHCIDGDTLKEVKVIDFDGSNWEQSILLERGQQVQQFSKQ
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_005274XLOC_005274Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00009417TCONS_00009417Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006913GFA/CENP-V
IPR011057Mss4-like
Vocabulary: Molecular Function
TermDefinition
GO:0016846carbon-sulfur lyase activity
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
molecular_function GO:0016846 carbon-sulfur lyase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006913Glutathione-dependent formaldehyde-activating enzyme/centromere protein VPFAMPF04828GFAcoord: 34..107
e-value: 7.5E-9
score: 35.7
NoneNo IPR availableGENE3D3.90.1590.10coord: 1..140
e-value: 1.2E-32
score: 112.4
IPR011057Mss4-likeSUPERFAMILY51316Mss4-likecoord: 8..129

Blast
[Close]
BLAST of TCONS_00009417-protein vs. Swiss-Prot (Human)
Match: CENPV (Centromere protein V OS=Homo sapiens GN=CENPV PE=1 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 5.955e-54
Identity = 73/118 (61.86%), Postives = 91/118 (77.12%), Query Frame = 0 
Query:    9 VLHKGSCHCGKIRFEVEAPEKITCVTCNCSICNKKQNHHFIVPRSKFRLLEGADFITTYTFNTHMAKHTFCKVCGVQSFYTPRSNPDGVGVMPHCIDGDTLKEVKVIDFDGSNWEQSI 126
            V H G CHCG +RFEV A   +    CNCSIC KKQN HFIVP S+F+LL+GA+ ITTYTFNTH A+HTFCK CGVQSFYTPRSNP G G+ PHC+D  T++ +   +F+GS+WE+++
Sbjct:  146 VKHTGGCHCGAVRFEVWASADLHIFDCNCSICKKKQNRHFIVPASRFKLLKGAEHITTYTFNTHKAQHTFCKRCGVQSFYTPRSNPGGFGIAPHCLDEGTVRSMVTEEFNGSDWEKAM 263
The following BLAST results are available for this feature:
BLAST of TCONS_00009417-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CENPV5.955e-5461.86Centromere protein V OS=Homo sapiens GN=CENPV PE=1... [more]
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