TCONS_00009414-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00009414-protein
Unique NameTCONS_00009414-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length526

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00009414-protein ID=TCONS_00009414-protein|Name=TCONS_00009414-protein|organism=Clytia hemisphaerica|type=polypeptide|length=526bp
MRIQXKNNEKQELVDMRNENTRLEKTITSLKEEIESLQIQVKKCQKEIGI
EYKKYRDELDARKLLIQDINDMRYQQEELKKALSGNAGKEGEHKEDAVIL
KIALTKAREELSSKTQRLTEVLSDYGDVVPRREFEALERQFKALGEEHAE
MKKNNNQLLKEHSALIDVHKKVIEQRDGFAMDCERMRQSATPRPDWNKCG
LYVEGGFERWSNLADNTSTNEKLDLLLSEMTGQDVSVIKAGGGIVDYFEP
KGVDESIPKYLHSNERVRNRRLNKRDLLIMIKDVWMEKTKEEGHEPFTKD
RANMADYLFTYLRQRFGVDAMVTEWGYNLHDAMVRYSFDSNVAQFSSILN
NELDEDVHFMQLKRLENMFKALVQKDASETGSLSKENFQTILKAHFHFVS
DDVITKMVDAAVEELGGEKEDGQILYKDLFTEDDEGRMGAFVKLILQTYE
DDKAEMIRHIETTFEKKSEINSNELKTAFLDFYPKLGKSKKAAETMITMA
FKDGNYNGTEKSIILRNLQMSCIGRS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_005271XLOC_005271Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00009414TCONS_00009414Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011992EF-hand-dom_pair
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 134..161
NoneNo IPR availableCOILSCoilCoilcoord: 6..47
NoneNo IPR availableGENE3D1.20.5.50coord: 13..45
e-value: 0.0016
score: 17.7
NoneNo IPR availableGENE3D1.20.58.130coord: 46..141
e-value: 0.076
score: 12.7
NoneNo IPR availableGENE3D1.20.5.400coord: 142..191
e-value: 5.2E-5
score: 22.7
NoneNo IPR availableGENE3D1.10.238.10coord: 254..431
e-value: 1.1E-4
score: 21.5
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 361..504

Blast
[Close]
BLAST of TCONS_00009414-protein vs. Swiss-Prot (Human)
Match: TXIP1 (Translin-associated factor X-interacting protein 1 OS=Homo sapiens GN=TSNAXIP1 PE=1 SV=1)

HSP 1 Score: 248.054 bits (632), Expect = 2.197e-74
Identity = 157/500 (31.40%), Postives = 272/500 (54.40%), Query Frame = 0 
Query:    9 EKQELVDMRNENTRLEKTITSLKEEIESLQIQVKKCQKEIGIEYKKYRDELDARKLLIQDINDMRYQQEELKKALSGNAGKEGEHKEDAVILKIALTKAREELSSKTQRLTEVLSDYGDVVPRREFEALERQFKALGEEHAEMKKNNNQLLKEHSALIDVHKKVIEQRDGFAMDCERMRQSATPRPDWNKCGLYVEGGFERWSNLADNTSTNEKLDLLLSEMTGQDVSVIKAGGGIV---DYFEPKGVDESIPKYLHSNERVRNRRLNKRDLLIMIKDVWMEKTKEEGHEPFTKDRANMADYLFTYLRQRFGV-DAMVTEWGYNLHDAMVRYSFDSNVAQFSSILNNELDEDVHFMQLKRLENMFKALVQKDASETGSLSKENFQTILKAHFHFVSDDVITKMVDAAVEELGGEKEDGQILYKDLFTEDDEGRMGAFVKLILQTYEDDKAEMIRHI--ETTFEKKSEINSNELKTAFLDFYPKLGKSKKAAETMITMAFK 502
            EK E+  ++ E   L K I    EE  SLQ +V K +K +  EY  Y  E DA K+LI D+N++RYQ+E++  +L+ + G  GE   D V L +AL   R++L+     L  + +++GDVVPRR+FE  E+  K L E+   ++ +  ++ KEH  L+ +H   +++RD F  + + +++++TPRPDW KC   V GG ERW  LA+  ++++ +D+LL E+          G G++   D+F   G  E+IP +L  +  V N++ +K+D++ ++KD W E+  EE  E F        D+ F +L  RFG  DAM   W Y + + +  +  +  ++QF ++L  +  E+V+  Q + +  + K +   D+   G L+ E F T+LK+ F   +++ I ++++A          D  + Y+ LF ED+EG+   FV+ + + Y D+K E ++ +  E   E   E+   +L+   +   P L   K+   T ++ AF+
Sbjct:  141 EKYEISLLKKEKMNLLKLIDKKNEEKISLQSEVTKLRKNLAEEYLHYLSERDACKILIADLNELRYQREDM--SLAQSPGIWGE---DPVKLTLALKMTRQDLTRTQMELNNMKANFGDVVPRRDFEMQEKTNKDLQEQLDTLRASYEEVRKEHEILMQLHMSTLKERDQFFSELQEIQRTSTPRPDWTKCKDVVAGGPERWQMLAEGKNSDQLVDVLLEEI----------GSGLLREKDFFPGLGYGEAIPAFLRFDGLVENKKPSKKDVVNLLKDAWKERLAEEQKETF-------PDFFFNFLEHRFGPSDAMA--WAYTIFENIKIFHSNEVMSQFYAVLMGKRSENVYVTQKETVAQLLKEMTNADSQNEGLLTMEQFNTVLKSTFPLKTEEQIQELMEAGGWHPSSSNAD-LLNYRSLFMEDEEGQSEPFVQKLWEQYMDEKDEYLQQLKQELGIELHEEVTLPKLRGGLMTIDPSL--DKQTVNTYMSQAFQ 613
The following BLAST results are available for this feature:
BLAST of TCONS_00009414-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TXIP12.197e-7431.40Translin-associated factor X-interacting protein 1... [more]
back to top