TCONS_00009403-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00009403-protein
Unique Name	TCONS_00009403-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	651

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00009403-protein ID=TCONS_00009403-protein|Name=TCONS_00009403-protein|organism=Clytia hemisphaerica|type=polypeptide|length=651bp
MRQEIKMADPLRHIYQEGINKLRSNPNAYFYYESGADYEQTLADNEYAYK
RYKVYPHLLKNDSRKTRQDDIDLSVNAFGEDFDIPIFLAPTAMQKMAHTD
GEVGTAGAAVSKGTCMGVSTLSTTSYENLRQIVPHCTYLMQLYVTKDASL
SNALIKKAESAGFKGVLFTVDAPILGQRIADVKSKFHLPRHLSLENFNGV
IEHVDEGLMKYISDNTSSALCWDDVKKIRSITNMPIYLKGIITHEDAEKC
LEHDVQGIIVSNHGGRQLDGTPATIDVLSEIVRAVGHRIPVYVDGGIRRG
SDVFKALALGARGVFIGRPVLYGLSYDGEEGVKEILDHMIHELKSLMRLT
GCRSIKDINSSLVFHESKFGIHTKTKAIRHWAITPDIPVCIADIKEGAKQ
TGFHINEKRESTFEEAFERLRFRPRRLRGLPPYETMKRLMPICLLHDQNT
TDILNKVDVREPCFLKIDCITKFDYNSLNTKKYNGLVVDLSLDNLEKIKE
LKLRTGLPVLATGVTSRHDTLQCLRYQLDGIVVSTKNCEDQLTPIEILPE
IAETIRCRIPIYFEGGIRKGTDIVKALARGASFVFVKEPLLWAHSYKGSE
GVSKVLDILNEEFQRAMYLAGCKDVETIKPSLVVDEQYFYDNLNGRNISK
I

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_005265	XLOC_005265	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00009403	TCONS_00009403	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000262	FMN-dep_DH
IPR013785	Aldolase_TIM
IPR008259	FMN_hydac_DH_AS
IPR012133	Alpha-hydoxy_acid_DH_FMN

Vocabulary: **Molecular Function**
Term	Definition
GO:0016491	oxidoreductase activity
GO:0003824	catalytic activity
GO:0010181	FMN binding

Vocabulary: **Biological Process**
Term	Definition
GO:0055114	oxidation-reduction process

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055114	oxidation-reduction process
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0010181	FMN binding
molecular_function	GO:0016491	oxidoreductase activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000262	FMN-dependent dehydrogenase	PFAM	PF01070	FMN_dh	coord: 485..633 e-value: 1.4E-38 score: 132.7 coord: 25..363 e-value: 2.7E-114 score: 381.7
IPR013785	Aldolase-type TIM barrel	GENE3D	3.20.20.70		coord: 15..368 e-value: 2.7E-96 score: 322.3 coord: 485..638 e-value: 1.2E-26 score: 93.2
IPR008259	FMN-dependent alpha-hydroxy acid dehydrogenase, active site	PROSITE	PS00557	FMN_HYDROXY_ACID_DH_1	coord: 261..267
IPR012133	Alpha-hydroxy acid dehydrogenase, FMN-dependent	PROSITE	PS51349	FMN_HYDROXY_ACID_DH_2	coord: 412..638 score: 26.81
IPR012133	Alpha-hydroxy acid dehydrogenase, FMN-dependent	PROSITE	PS51349	FMN_HYDROXY_ACID_DH_2	coord: 5..368 score: 92.165
None	No IPR available	CDD	cd02809	alpha_hydroxyacid_oxid_FMN	coord: 26..359 e-value: 3.39063E-131 score: 389.884
None	No IPR available	SUPERFAMILY	51395	FMN-linked oxidoreductases	coord: 483..633
None	No IPR available	SUPERFAMILY	51395	FMN-linked oxidoreductases	coord: 23..364

Blast

[Close]

BLAST of TCONS_00009403-protein vs. Swiss-Prot (Human)
Match: HAOX1 (Hydroxyacid oxidase 1 OS=Homo sapiens GN=HAO1 PE=1 SV=1)

HSP 1 Score: 315.849 bits (808), Expect = 3.200e-102
Identity = 148/343 (43.15%), Postives = 228/343 (66.47%), Query Frame = 0

Query:   29 YFYYESGADYEQTLADNEYAYKRYKVYPHLLKNDSRKTRQDDIDLSVNAFGEDFDIPIFLAPTAMQKMAHTDGEVGTAGAAVSKGTCMGVSTLSTTSYENLRQIVPHCTYLMQLYVTKDASLSNALIKKAESAGFKGVLFTVDAPILGQRIADVKSKFHLPRHLSLENFNGVIEHV--------DEGLMKYISDNTSSALCWDDVKKIRSITNMPIYLKGIITHEDAEKCLEHDVQGIIVSNHGGRQLDGTPATIDVLSEIVRAVGHRIPVYVDGGIRRGSDVFKALALGARGVFIGRPVLYGLSYDGEEGVKEILDHMIHELKSLMRLTGCRSIKDINSSLV 363
            Y YY SGA+ E+TLADN  A+ R+K+YP +L+N +      + DLS +  G+   +PI +  TAMQ+MAH DGE+ T  A  S GT M +S+ +T+S E + +  P     +QLY+ KD  ++  L+++AE  G+K +  TVD P LG R+ DV+++F LP  L ++NF               D GL  Y++     ++ W+D+K +R +T++PI  KGI+  +DA + ++H + GI+VSNHG RQLDG PATIDVL EIV AV  ++ V++DGG+R+G+DV KALALGA+ VF+GRP+++GL++ GE+GV+++L+ +  E +  M L+GC+++K I+ +LV
Sbjct:   24 YDYYRSGANDEETLADNIAAFSRWKLYPRMLRNVA------ETDLSTSVLGQRVSMPICVGATAMQRMAHVDGELATVRACQSLGTGMMLSSWATSSIEEVAEAGPEALRWLQLYIYKDREVTKKLVRQAEKMGYKAIFVTVDTPYLGNRLDDVRNRFKLPPQLRMKNFETSTLSFSPEENFGDDSGLAAYVAKAIDPSISWEDIKWLRRLTSLPIVAKGILRGDDAREAVKHGLNGILVSNHGARQLDGVPATIDVLPEIVEAVEGKVEVFLDGGVRKGTDVLKALALGAKAVFVGRPIVWGLAFQGEKGVQDVLEILKEEFRLAMALSGCQNVKVIDKTLV 360

HSP 2 Score: 123.25 bits (308), Expect = 1.375e-30
Identity = 61/154 (39.61%), Postives = 100/154 (64.94%), Query Frame = 0

Query:  483 YNGLVVDLSLDNLEKIKELKLRTGLPVLATGVTSRHDTLQCLRYQLDGIVVS---TKNCEDQLTPIEILPEIAETIRCRIPIYFEGGIRKGTDIVKALARGASFVFVKEPLLWAHSYKGSEGVSKVLDILNEEFQRAMYLAGCKDVETIKPSLV 633
            Y    +D S+ + E IK L+  T LP++A G+    D  + +++ L+GI+VS    +  +     I++LPEI E +  ++ ++ +GG+RKGTD++KALA GA  VFV  P++W  +++G +GV  VL+IL EEF+ AM L+GC++V+ I  +LV
Sbjct:  208 YVAKAIDPSI-SWEDIKWLRRLTSLPIVAKGILRGDDAREAVKHGLNGILVSNHGARQLDGVPATIDVLPEIVEAVEGKVEVFLDGGVRKGTDVLKALALGAKAVFVGRPIVWGLAFQGEKGVQDVLEILKEEFRLAMALSGCQNVKVIDKTLV 360

The following BLAST results are available for this feature:

BLAST of TCONS_00009403-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00009403-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
HAOX1	3.200e-102	43.15	Hydroxyacid oxidase 1 OS=Homo sapiens GN=HAO1 PE=1...	[more]

You are here

TCONS_00009403-protein (polypeptide) - C. hemisphaerica