TCONS_00009102-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00009102-protein
Unique NameTCONS_00009102-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length466

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00009102-protein ID=TCONS_00009102-protein|Name=TCONS_00009102-protein|organism=Clytia hemisphaerica|type=polypeptide|length=466bp
MADTPNSISEIPQDVLQDLCSRFLINIPDNEKNDMVRICFQIEQAHWYYI
DFCRQEDPDLPPCGMKPFMNMIFSRFEFLNKTGQSVSAIYEEWRKYKIRV
PVFGAILIDDTLEQILLVQGFHNKASWGFPKGKVNKDEEGLTCAIREVWE
EVGFDISKLAKESDFIENNFHDHQIRLYIVPGVDKTFDFKPNTRGEIKEI
RWFDLSYLPAHKRDMKPKEIGFTPNNFFMIHPFVRPLRKWIQDKKEAMSN
QKHSILEDYFSGSTSEKSNFLSSASPQSEERREHLKKKRKKEQEEQYKQL
HILMNPLNPLRSHVANENALKSILGVQTSQPQPEQPEVIRKLLTGNVPRS
PPTNSFKRSQKDHSKDSKRRPNSTSLFSTENDEKSSRGGVDLLGHSLYSP
FAMTSLLPKDQASPLKANTNVSSQTTSGKKLGNAKGKKKLVYADFDFSSP
AFTNFRFDYQSILNEL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_005102XLOC_005102Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00009102TCONS_00009102Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007722DCP2_BoxA
IPR000086NUDIX_hydrolase_dom
IPR020084NUDIX_hydrolase_CS
IPR015797NUDIX_hydrolase_dom-like
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0030145manganese ion binding
GO:0003723RNA binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0030145 manganese ion binding
molecular_function GO:0003723 RNA binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 275..295
NoneNo IPR availableGENE3D3.90.79.10coord: 101..253
e-value: 4.0E-34
score: 117.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 413..433
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 343..388
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 263..295
NoneNo IPR availableCDDcd03672Dcp2pcoord: 100..246
e-value: 2.19428E-64
score: 205.549
IPR007722mRNA decapping protein 2, Box A domainSMARTSM01125DCP2_2coord: 13..97
e-value: 1.2E-35
score: 134.4
IPR007722mRNA decapping protein 2, Box A domainPFAMPF05026DCP2coord: 14..96
e-value: 1.7E-30
score: 105.0
IPR007722mRNA decapping protein 2, Box A domainSUPERFAMILY140586Dcp2 domain-likecoord: 10..97
IPR000086NUDIX hydrolase domainPFAMPF00293NUDIXcoord: 100..214
e-value: 9.2E-18
score: 64.5
IPR000086NUDIX hydrolase domainPROSITEPS51462NUDIXcoord: 98..228
score: 16.324
IPR020084NUDIX hydrolase, conserved sitePROSITEPS00893NUDIX_BOXcoord: 132..153
IPR015797NUDIX hydrolase domain-likeSUPERFAMILY55811Nudixcoord: 60..213

Blast
[Close]
BLAST of TCONS_00009102-protein vs. Swiss-Prot (Human)
Match: DCP2 (m7GpppN-mRNA hydrolase OS=Homo sapiens GN=DCP2 PE=1 SV=2)

HSP 1 Score: 270.781 bits (691), Expect = 1.884e-86
Identity = 126/289 (43.60%), Postives = 178/289 (61.59%), Query Frame = 0 
Query:   10 EIPQDVLQDLCSRFLINIPDNEKNDMVRICFQIEQAHWYYIDFCRQEDPDLPPCGMKPFMNMIFSRFEFLNKTGQSVSAIYEEWRKYKIRVPVFGAILIDDTLEQILLVQGFHNKASWGFPKGKVNKDEEGLTCAIREVWEEVGFDISKLAKESDFIENNFHDHQIRLYIVPGVDKTFDFKPNTRGEIKEIRWFDLSYLPAHKRDMKPK-EIGFTPNNFFMIHPFVRPLRKWIQDKKEAMSNQKHSILEDYFSGSTSEKSNFLSSASPQSEERREHLKKKRKKEQEEQY 297
            EIP  VL D CSRF+++IP  E+++ +R+CFQIE AHW+Y+DF  Q  P LP CG++ F   +FS   FL   G+ V  + +EW++YK+ VP +GAI++D+TLE +LLVQG+  K+ WGFPKGKVNK+E    CA REV+EE GFDI     + D+IE   +D   RLYI+PG+ K   F P TR EI+ I WF +  LP H+ DM PK ++G  PN FFM  PF+RPLR W+  +               F  S+   + F S+ S  ++   E L + + +  ++ +
Sbjct:    7 EIPGSVLDDFCSRFILHIPSEERDNAIRVCFQIELAHWFYLDFYMQNTPGLPQCGIRDFAKAVFSHCPFLLPQGEDVEKVLDEWKEYKMGVPTYGAIILDETLENVLLVQGYLAKSGWGFPKGKVNKEEAPHDCAAREVFEETGFDIKDYICKDDYIELRINDQLARLYIIPGIPKDTKFNPKTRREIRNIEWFSIEKLPCHRNDMTPKSKLGLAPNKFFMAIPFIRPLRDWLSRR---------------FGDSSDSDNGFSSTGSTPAKPTVEKLSRTKFRHSQQLF 280
The following BLAST results are available for this feature:
BLAST of TCONS_00009102-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DCP21.884e-8643.60m7GpppN-mRNA hydrolase OS=Homo sapiens GN=DCP2 PE=... [more]
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