TCONS_00009025-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00009025-protein
Unique NameTCONS_00009025-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length283

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00009025-protein ID=TCONS_00009025-protein|Name=TCONS_00009025-protein|organism=Clytia hemisphaerica|type=polypeptide|length=283bp
MFRFMVGLALIASASAWWSSGGNGGDNNANAKCGISKVAQSRIVNGVEAK
AGAWPWIVSLQSSGGSRTHFCGGTILTPNWILTASHCVERNKNNPGYFHV
VAGAHDKSRQESSKQKAVGKRVIMHPNYGQGGALNADVALIELRTPLRLN
DRVVKACMPQQGVYPKVGKNCYIAGWGTTTHPGNSPNRLQQAKLPVVGTP
HRGCHNNREVVCVGLGFGKQSDGKQHPNACRGDSGGPLMCQQSNGSWTVE
GVASYVYTYCKYYTAYAPVNKYLPWIKQYVPNL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_005046XLOC_005046Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00009025TCONS_00009025Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001314Peptidase_S1A
IPR001254Trypsin_dom
IPR033116TRYPSIN_SER
IPR018114TRYPSIN_HIS
IPR009003Peptidase_S1_PA
Vocabulary: Molecular Function
TermDefinition
GO:0004252serine-type endopeptidase activity
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
molecular_function GO:0004252 serine-type endopeptidase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001314Peptidase S1A, chymotrypsin familyPRINTSPR00722CHYMOTRYPSINcoord: 72..87
score: 49.78
coord: 133..147
score: 31.88
coord: 227..239
score: 59.88
IPR001254Serine proteases, trypsin domainSMARTSM00020trypsin_2coord: 42..276
e-value: 5.7E-63
score: 225.2
IPR001254Serine proteases, trypsin domainPFAMPF00089Trypsincoord: 43..276
e-value: 3.4E-54
score: 183.9
IPR001254Serine proteases, trypsin domainPROSITEPS50240TRYPSIN_DOMcoord: 43..281
score: 30.231
IPR001254Serine proteases, trypsin domainCDDcd00190Tryp_SPccoord: 43..278
e-value: 1.12488E-69
score: 216.759
NoneNo IPR availableGENE3D2.40.10.10coord: 42..53
e-value: 4.2E-4
score: 19.5
NoneNo IPR availableGENE3D2.40.10.10coord: 54..75
e-value: 4.4E-19
score: 67.9
NoneNo IPR availableGENE3D2.40.10.10coord: 156..282
e-value: 3.6E-26
score: 91.5
NoneNo IPR availableGENE3D2.40.10.10coord: 76..155
e-value: 1.8E-26
score: 91.8
IPR033116Serine proteases, trypsin family, serine active sitePROSITEPS00135TRYPSIN_SERcoord: 228..239
IPR018114Serine proteases, trypsin family, histidine active sitePROSITEPS00134TRYPSIN_HIScoord: 82..87
IPR009003Peptidase S1, PA clanSUPERFAMILY50494Trypsin-like serine proteasescoord: 8..280

Blast
[Close]
BLAST of TCONS_00009025-protein vs. Swiss-Prot (Human)
Match: CTRB2 (Chymotrypsinogen B2 OS=Homo sapiens GN=CTRB2 PE=2 SV=2)

HSP 1 Score: 145.976 bits (367), Expect = 2.575e-42
Identity = 86/243 (35.39%), Postives = 130/243 (53.50%), Query Frame = 0 
Query:   41 SRIVNGVEAKAGAWPWIVSLQSSGGSRTHFCGGTILTPNWILTASHCVERNKNNPGYFHVVAGAHDKSRQESSKQKAVGKRVIMHPNYGQGGALNADVALIELRTPLRLNDRVVKACMPQQGVYPKVGKNCYIAGWGTTTHPGN-SPNRLQQAKLPVVGTPHRGCHNNREVVCVGLGFGKQSDGKQHPNACRGDSGGPLMCQQSNGSWTVEGVASYVYTYCKYYT--AYAPVNKYLPWIKQYV 280
            SRIVNG +A  G+WPW VSLQ   G   HFCGG++++ +W++TA+HC  R  +      VVAG  D+   E + Q     +V  +P +     +N D+ L++L TP R +  V   C+P        G  C   GWG T +  N +P++LQQA LP++          R +  V +       G    ++C GDSGGPL+CQ+ +G+WT+ G+ S+    C   T   YA V K +PW+++ +
Sbjct:   32 SRIVNGEDAVPGSWPWQVSLQDKTG--FHFCGGSLISEDWVVTAAHCGVRTSD-----VVVAGEFDQGSDEENIQVLKIAKVFKNPKFSIL-TVNNDITLLKLATPARFSQTVSAVCLPSADDDFPAGTLCATTGWGKTKYNANKTPDKLQQAALPLLSNAECKKSWGRRITDVMI-----CAGASGVSSCMGDSGGPLVCQK-DGAWTLVGIVSWGSRTCSTTTPAVYARVAKLIPWVQKIL 260
The following BLAST results are available for this feature:
BLAST of TCONS_00009025-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CTRB22.575e-4235.39Chymotrypsinogen B2 OS=Homo sapiens GN=CTRB2 PE=2 ... [more]
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