TCONS_00008792-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00008792-protein
Unique NameTCONS_00008792-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length212

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00008792-protein ID=TCONS_00008792-protein|Name=TCONS_00008792-protein|organism=Clytia hemisphaerica|type=polypeptide|length=212bp
ELVSFKDIDESRFIHYEAVNKRGLEKFWIGYTDVVNEGSFKWTDHTEFGF
TLFAAGEPNNAGNEHCVYQRKTGYWNDANCELKAGYVCKKPYFNPNRGGK
SYRFFKRLSTWDIARQLCEQLKGSLVTIDSEAENEFLARESGNRGFSGTW
IGYNDKDVEGTFKWVSGATTCYKKWLSGQPSSPDCVFLNPFTKYWSTSTC
GFTRPYICEFNF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_004927XLOC_004927Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00008792TCONS_00008792Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001304C-type_lectin-like
IPR016186C-type_lectin-like/link
IPR018378C-type_lectin_CS
IPR016187CTDL_fold
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001304C-type lectin-likeSMARTSM00034CLECT_2coord: 91..209
e-value: 1.8E-22
score: 90.7
coord: 1..89
e-value: 0.0018
score: 27.5
IPR001304C-type lectin-likePFAMPF00059Lectin_Ccoord: 2..90
e-value: 4.9E-15
score: 56.1
coord: 109..210
e-value: 8.6E-19
score: 68.2
IPR001304C-type lectin-likePROSITEPS50041C_TYPE_LECTIN_2coord: 1..89
score: 17.984
IPR001304C-type lectin-likePROSITEPS50041C_TYPE_LECTIN_2coord: 97..209
score: 22.861
IPR016186C-type lectin-like/link domainGENE3D3.10.100.10coord: 1..95
e-value: 1.8E-23
score: 82.6
IPR016186C-type lectin-like/link domainGENE3D3.10.100.10coord: 96..211
e-value: 6.1E-31
score: 107.0
IPR018378C-type lectin, conserved sitePROSITEPS00615C_TYPE_LECTIN_1coord: 66..88
NoneNo IPR availableCDDcd00037CLECTcoord: 2..90
e-value: 3.58034E-20
score: 81.5121
NoneNo IPR availableCDDcd00037CLECTcoord: 102..210
e-value: 3.35236E-25
score: 94.9941
IPR016187C-type lectin foldSUPERFAMILY56436C-type lectin-likecoord: 98..211
IPR016187C-type lectin foldSUPERFAMILY56436C-type lectin-likecoord: 2..92

Blast
[Close]
BLAST of TCONS_00008792-protein vs. Swiss-Prot (Human)
Match: MRC2 (C-type mannose receptor 2 OS=Homo sapiens GN=MRC2 PE=1 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 1.416e-20
Identity = 60/238 (25.21%), Postives = 104/238 (43.70%), Query Frame = 0 
Query:    1 ELVSFKDIDESRFIHYEAVNKRGLEKFWIGYTDVVNEGSFKWTDHTEFGFTLFAAGEPNNAGNEHC--VYQRKTGYWNDANCELKAGYVCKK----------------------PYFNPNRGGKSYRFFKRLSTWDIARQLCEQLKGSLVTIDSEAENEFLARESGNRGFSGTWIGYNDKDVEGTFKWVSGATTCYKKWLSGQP-----SSPDCVFLNPFTKYWSTSTCGFTRPYICE 209
            +L+S  +I E  +I+            WIG  D+   G ++W+D++   +  + + +P+N   E+C  +    +G W + +C +   YVCKK                      P + P + G  YR      +W  +++ C +  G LV+I S AE EF+ ++   +     WIG ND  ++  F+W  G+   +  W   +P     S  DCV +      W+ S C  + P IC+
Sbjct:  272 DLLSITEIHEQTYINGLLTGYSS--TLWIGLNDLDTSGGWQWSDNSPLKYLNWESDQPDNPSEENCGVIRTESSGGWQNRDCSIALPYVCKKKPNATAEPTPPDRWANVKVECEPSWQPFQ-GHCYRLQAEKRSWQESKKACLRGGGDLVSIHSMAELEFITKQI-KQEVEELWIGLNDLKLQMNFEWSDGSLVSFTHWHPFEPNNFRDSLEDCVTIWGPEGRWNDSPCNQSLPSICK 505
The following BLAST results are available for this feature:
BLAST of TCONS_00008792-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MRC21.416e-2025.21C-type mannose receptor 2 OS=Homo sapiens GN=MRC2 ... [more]
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