TCONS_00008591-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00008591-protein
Unique Name	TCONS_00008591-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	836

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00008591-protein ID=TCONS_00008591-protein|Name=TCONS_00008591-protein|organism=Clytia hemisphaerica|type=polypeptide|length=836bp
MGQEDCYEIIQALRRDFHSLSDQNKIARRRALEKIGKETFEKKPKPDVEV
LKTIFDQIYKDVLKLFSDPVDRTRETAIKLATKFLTVLNGLDNYHAYIIP
TIKQRLTADEEPEPTEEIRLLLVETLRILIDLAGEQTAAFIDDHVNILQK
TLVDSFPDVRKESCQCVRRLYEVSPQPFYMQGESLIKPLLKSLSHQHNKV
RTAMIETIGITILGTSGKAVDEVFTHLAQRTFDHSGVVRLAVVNVVGRWL
LELRDRYSFFSKLLPLLLSGFSDELPDIVNKSQTWFKQAGALYEEENEKD
FKEKKEYLTQKHFEDALDHERPSLGCRALVQQNFSKILPAIINDITDWTP
STRIKSASLLYHMVYFCEDHVTMNIELLSQGLYRAAEDDEKEVVQHVLKT
AELVGLFVEPRVYMNLIIPHLESVTLSPKSISRTLRILSCFVKKANYRLI
GDEITRVCKTLSSPEISSTIDQSCQESLLECTNQIIAKNGINHSEFSKDL
FKVLLNVTSLACNGEVKNQVKSQLGELSLKLNMTSSDDLFNMFGSELTME
LKDSCKQWTGQSPEFYLYIAILSESKMALVSFLQTALEIFVQCSDASRDP
EMRQKMFVNLSQLVLSCRGEESLIKELQQCALKLLRETVLPNCIWQAGRT
AAAVRSVAISFLWAMLESGVITDGHLKESFKEIHTQIIACLDDHNETTRL
VTVKVMLKLLQVCGPSFDVEQLHVIYPEVLKRLDDSSDDIRILATKALAA
YFNSLPSNYDREFFQVHLEFIYKTLLIHMDDSHQNVQEAVYTCLKEGVQI
HAGLLKNKVEDVKNKHRTKTYCEELSKLCESQLREV

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_004806	XLOC_004806	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00008591	TCONS_00008591	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR011989	ARM-like
IPR021133	HEAT_type_2
IPR016024	ARM-type_fold

Vocabulary: **Molecular Function**
Term	Definition
GO:0005488	binding

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005488	binding

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 10..30
None	No IPR available	COILS	Coil	Coil	coord: 822..836
IPR011989	Armadillo-like helical	GENE3D	1.25.10.10		coord: 567..836 e-value: 1.9E-19 score: 68.9
IPR011989	Armadillo-like helical	GENE3D	1.25.10.10		coord: 2..528 e-value: 1.2E-37 score: 128.6
IPR021133	HEAT, type 2	PROSITE	PS50077	HEAT_REPEAT	coord: 725..763 score: 8.606
IPR016024	Armadillo-type fold	SUPERFAMILY	48371	ARM repeat	coord: 571..831 coord: 18..533

Blast

[Close]

BLAST of TCONS_00008591-protein vs. Swiss-Prot (Human)
Match: DAAF5 (Dynein assembly factor 5, axonemal OS=Homo sapiens GN=DNAAF5 PE=1 SV=4)

HSP 1 Score: 455.677 bits (1171), Expect = 1.001e-147
Identity = 259/723 (35.82%), Postives = 413/723 (57.12%), Query Frame = 0

Query:  106 LTADEEPEPTEEIRLLLVETLRILIDLAGEQTAAFIDDHVNILQKTLVDSFPDVRKESCQCVRRLYEVSPQPFYMQGESLIKPLLKSLSHQHNKVRTAMIETIGITILGTSGKAVDEVFTHLAQRTFDHSGVVRLAVVNVVGRWLLELRDRYSFFSKLLPLLLSGFSDELPDIVNKSQTWFKQAGALYEEENEKDFKEKKEYLTQKHFEDALDHERPSLGCRALVQQNFSKILPAIINDITDWTPSTRIKSASLLYHMVYFCEDHVTMNIELLSQGLYRAAEDDEKEVVQHVLKTAELVGLFVEPRVYMNLIIPHLESVTLSPKSISRTLRILSCFVKKANYRLIGDEITRVCKTLSSPEISSTIDQSCQ-ESLLECTNQIIAKNGINHSEFSKDLFKVLLNVTSLACNGEVKNQVKSQLGELSLKLNMTSSDDLFNMFGSELTMELKDSCKQWTGQSPEFYLYIAILSESKMALVSFLQTALEIFVQCSDASRDPEMRQKMFVNLSQLVLSCRGEESLIKELQQCAL--KLLRETVLPNCIWQAGRTAAAVRSVAISFLWAMLESGVITDGHLKESFKEIHTQIIACLDDHNETTRLVTVKVMLKLLQVCGPSFDVEQLHVIYPEVLKRLDDSSDDIRILATKALAAYFNSLPSNYDREFFQVHLEFIYKTLLIHMDDSHQNVQEAVYTCLKEGVQIHAGLLKNKVEDVKNKHRTKTYCEEL 825
            + A   PE  EE+RL LV+ L + +DL G   A  +DD +  L+ +L+D F  VR+ESC C   L + +P  F+MQ ESLI PL++++SHQH KVR A IE  G  I   +GK+VD+V +H AQR FD    VR AV +VVG WLL LRDRYSFF KL+PLLLS  +DE+P++   + + ++  G  +++ENE+D K+K ++             RP LGCR LV +N SKILPA+ +DITDW   TR+KSA LL  ++   EDH T ++E++ + L++A  D+E  VVQ   ++AELVG FV P V++ LI+      TL     +  L +L+  ++      +   +  +   L+   I    +     E LL C   +++    +    S  L  VLL + +LA    ++++ +  +  L++   ++S  DL+      L   +  S   WT  SPE   +  I+++S  AL   L   +     C   S+DP+MR K+F  LS ++L  R  +++  + Q  +    + ++ + PN  W AGRTAAA+R+ A+S LWA+  S V++   +++  + +  Q++  L++ ++ TRL++ +++   L+  G   D E+L  IYPE+LKRLDD S+D+R+ A   L  +   +     + ++Q  ++++Y+ LL+H+DD  + +Q+A+   LKEG  +   LL  + E V +KHR+ TYCE+L
Sbjct:  129 VPARRPPEACEELRLALVQLLGLAVDLCGAALAPHLDDALRALRCSLLDPFAAVRRESCSCAAALAQATPDHFHMQSESLIGPLMQTISHQHWKVRVAAIEATGAVIHFGNGKSVDDVLSHFAQRLFDDVPQVRRAVASVVGGWLLCLRDRYSFFHKLIPLLLSSLNDEVPEVRQLAASLWEDVGLQWQKENEEDLKDKLDFAPPTPPHYPPHERRPVLGCRELVFRNLSKILPALCHDITDWVVGTRVKSAQLLPVLLLHAEDHATQHLEVVLRTLFQACTDEEAAVVQSCTRSAELVGTFVSPEVFLKLIL-----STLKKTPSASGLLVLASAMRGCPREALQPHLAAIATELAQAHICQASENDLYLERLLLCVQALVSVCHEDCGVASLQLLDVLLTIVALAGATGLRDKAQETMDSLAMVEGVSSCQDLYRKHIGPLLERVTASHLDWTAHSPELLQFSVIVAQSGPALGEALPHVVPTLRACLQPSQDPQMRLKLFSILSTVLL--RATDTINSQGQFPSYLETVTKDILAPNLQWHAGRTAAAIRTAAVSCLWALTSSEVLSAEQIRDVQETLMPQVLTTLEEDSKMTRLISCRIINTFLKTSGGMTDPEKLIRIYPELLKRLDDVSNDVRMAAASTLVTWLQCVKGANAKSYYQSSVQYLYRELLVHLDDPERAIQDAILEVLKEGSGLFPDLLVRETEAVIHKHRSATYCEQL 844

The following BLAST results are available for this feature:

BLAST of TCONS_00008591-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00008591-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
DAAF5	1.001e-147	35.82	Dynein assembly factor 5, axonemal OS=Homo sapiens...	[more]

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TCONS_00008591-protein (polypeptide) - C. hemisphaerica