TCONS_00008538-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00008538-protein
Unique NameTCONS_00008538-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length437

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00008538-protein ID=TCONS_00008538-protein|Name=TCONS_00008538-protein|organism=Clytia hemisphaerica|type=polypeptide|length=437bp
MVSVYVRISFVPRNIMVDGYFFFRLSVIAALSYEASAFSASFTNALKDTK
TTDENAIVLQKPNIGHCLAACNFVEGGCQSISWHNGDKNCHIVKNDGNEN
DGDNELTVSAPGWVYYKKNEQPVDFDQTFMKPVKLINKEAVPSPSYTPWN
WQFSFDVNMTGADGNDQRTGEIIRVTNQSDINSIVLSVKKKTFDQLVVTF
ERDGTQHEKLIPSVQNGDSIILNFTRSHDTPNQQRLEITRKRIHHVFPVL
MITDTNLSDREIKVFYSKELASNIQTISSIPPLDGGWSSWSGFSSCTQTC
GSGTQHRTRACDNPASQYGGKHCEGYEREEQSCNTNLCPEQLLEACFDEC
RKTCATDIRPVFGCNQKFSCSNACKLRQMGSSITDCKLICQRPMDSDCYP
DYHGHYFYPCYSCNRDSCPGSTPPISECENGCESYQD
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_004779XLOC_004779Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00008538TCONS_00008538Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000884TSP1_rpt
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR01705TSP1REPEATcoord: 285..298
score: 43.43
coord: 322..333
score: 37.05
coord: 303..314
score: 46.5
IPR000884Thrombospondin type-1 (TSP1) repeatSMARTSM00209TSP1_2coord: 287..339
e-value: 5.5E-16
score: 69.1
IPR000884Thrombospondin type-1 (TSP1) repeatPFAMPF00090TSP_1coord: 288..338
e-value: 4.5E-10
score: 39.5
IPR000884Thrombospondin type-1 (TSP1) repeatGENE3D2.20.100.10coord: 283..338
e-value: 3.8E-17
score: 61.8
IPR000884Thrombospondin type-1 (TSP1) repeatPROSITEPS50092TSP1coord: 284..339
score: 13.522
IPR000884Thrombospondin type-1 (TSP1) repeatSUPERFAMILY82895TSP-1 type 1 repeatcoord: 282..338

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00008538-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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