TCONS_00008391-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00008391-protein
Unique NameTCONS_00008391-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length629

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00008391-protein ID=TCONS_00008391-protein|Name=TCONS_00008391-protein|organism=Clytia hemisphaerica|type=polypeptide|length=629bp
METFENCLQSLKQSKSDNERLAALMVISKLTQPTSTGYSPKPLEINEQLA
GRLYNAVSGTFIVRLLKTSESKDENSLLFHQLALNVLTVVARYHSHSISK
DDCVVEQLVSLLHETTKVEEQQSILDLLTVFLKDSHKLLLDKNPTKLLST
SLKLFKEKETEKSAEMFLTIIMSSDSWSHHLAIIMYERCEVLLNNQDLQK
FKELEILEKLTTLLRRHNAKMKLNEEKKTKMLENVALAAQDLLKSRVKSE
YKCLTISLVSNMIHFFGLDWIFTVNEDSSKFCLLLLACISVELAWILNSD
STLTENEVLAKERFVVACFEITKMIVVRICSEEFEDSELASNSSFIVNLF
NTFKNIINTVYSFIQTFYNQDACLDHPLLLGAMDLVCVWATEETESLQEE
LKTTIPILLKFARETLEKKNNGTIHHLFTSLLPCIAQLLPDNDLRKLMID
NGLLDLLQTFGDVIKTDEKENQLVECFIHIFHEVIILIPTHCKRVTWKAS
LIEKFVKLYHQGYEIRGMFTLYSRVEMTIVLLRLPVLCGLKLPDENFLQS
VTGFLSDNVDDLEDMGESYSDMWSIAMQSLLEVVSNNDFERNKLKGSSSV
KRALSEASKNAMSKNVKSLIKDLQRILYT
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_004711XLOC_004711Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00008391TCONS_00008391Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR008709Neurochondrin
IPR016024ARM-type_fold
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005488 binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 207..227
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 1..514
e-value: 1.0E-4
score: 20.5
IPR008709NeurochondrinPFAMPF05536Neurochondrincoord: 2..458
e-value: 1.1E-28
score: 99.9
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 3..282
coord: 337..510
coord: 541..588

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00008391-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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