TCONS_00008147-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00008147-protein
Unique NameTCONS_00008147-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1884

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00008147-protein ID=TCONS_00008147-protein|Name=TCONS_00008147-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1884bp
MDDSFEPVIEINKDEFTDQERRLILEVVARDEDVLRQEKSRIEHLQDELQ
QLEEKGVPEEDEATCGRICRRCRSPLGLVLNSGALCVSCSKTVCKDCRVE
TGIPSEDNTIPSWICTVCGKIREIRAESGAWFYQTTNTESDPEIVKKKKK
KKAYGSFLMKKVFSKVKRSDTVIYKDPDWSEVLHKDTIAEEDEDNTYLVV
SPSSSGTMNVKEVTHEELMKQDTAELDNVEIKLQSEEIEVHLVEDEKPED
EQEAIQEEETEKPSQASIYYNPGDDDSSSDEEESQLEQNNEISNEDDENG
EELTYETEQVEPEIPVADELSIKEETQDDSLKDIESTTVANVSDRSEETI
ATFELKPETVNIDQDVSEIIEEKTELNPFELIDDKEIDDKIESSTPSTLA
ESKSTTAVSENTDIVVEKTINMNIEKSELPTIIIEDDTGKVNIIPADSTD
DKIADQKASTPPPGQEEEYLDELVAEFNQHADIGDADSIGSDYSDEEDIA
ETVQVAGELLLGFRYVPKEKLFEVQVHKAKDLIIGDSIDNSTDPYVKIYL
RPETKRSAKRKTKVKKKTLNPDFDEILSFKLEYDQLISRTVAASVWHSSF
TQKNKCLGEALISIDEYLESGFSFDDPTPQWYTLKGRTIKRDQVEFCGDL
VANIWFKAPGFSPNEELGKKANPVKGSLEVHCIRAQNLKALHEGGFSNPF
CKMVLISKNSKHDKFKTHHIKGTIDPYWDKQFSFTNVQWVDLQDAVLQFS
VWDVEKGSSHVLLGGARLGLGRHDGQIHDSFGEEVEIWQKVLDYPNESKE
YFIPLRSTLDSVKQKAFAPPMPVKIMTISQHEEEKKTKFGSLSNLSAKKL
LNADTISLASTGSMLSLYSMAGGEHGNLTITGELLFSVKYDDLSGIFSIN
IEKAKGLAAVDAKKMTSDPYVKVYLLPDKNKTSKKKTMHRRKTINPIWNE
TIKYKLSKEDLLQKTLQLTIWNHDRLGKNDCLGEVQLNMKQYANTNKLNE
EQPVWYTLQSPAPVVGGGADDNIGELVLGLKYDNEQLIVTVKEAKGLTSL
TPNKMPNPFVKCYLLPDKSRKSKRKTGVQKKTNNPMWNEKFTYKHVSIDD
LNTRAIEITVWDYDSSAHQFLGGVRLGLPEGDEPWKDSFKDEVHLWESMM
NHLGILAEYTIPLRKTMTSVKNEQMGELPSVPMITEMNEPPKQSFALSQP
SIIQEEIVAEGIPSMRLSLQWSENVDEVDKKKKKANKGVLKVILKEAKCL
PEKPDGDVPSAYCKAILHPKKKSEKFATETYYKSSDPKWDANIVFEDVSL
EELRTRCMEITLYDDTVETKRMDKGLHFASLRLGSGGLIEKWDDSQGPEI
DLWFNVLNNPETWNTKLIPLRVDEYPEAKPKKSSSGSFKLKNITQGKSDT
SSVPEEEFSDDETEQPAAELDRSGSESPRTSALRAMGGDAAQGVINMMNE
QTEQTTFEAPYEGLTTISEENEIMNSVEIQRAPSMAPSITITQDVRAGDP
PFAYSQSEQKENSDDDEPQFDYPIPDKSSSKKMPPQMSLLKRSTSMTSIY
STDSANVYGQVPIRGEVQFGLKYDTTTSLFEVHVFKAKGIAAVDTKKETT
DPYCKVYLLPDRTKAGKKKTRTRKKTLNPEWDEILEFKINIRDLRLRTLS
LTIWHQEKLGRNVFLGEVMQDMSTLLDNGSLYGTPTTNWYDLQEKAQAPT
RELYRGELYISLCFEDDNFKGVREDTEDEKKKKKKKKKKDMKSNGRVNIH
ILKATDLPAADKDGASDPFCKVYLLPMKQSKHKRKTPVIRDTLCPVWDYR
TEYDIDYEDLGDHGIEFSVWDWDRGNSNDLLGCARIGPGNNSGEWDDANG
VEIEAWRHMIDNPNVWKEFKIKLRSELKSRNKKK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_004588XLOC_004588Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00008147TCONS_00008147Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000008C2_dom
IPR001565Synaptotagmin
IPR011011Znf_FYVE_PHD
IPR017455Znf_FYVE-rel
IPR010911Rab_BD
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0017137Rab GTPase binding
Vocabulary: Biological Process
TermDefinition
GO:0006886intracellular protein transport
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006886 intracellular protein transport
cellular_component GO:0016020 membrane
molecular_function GO:0017137 Rab GTPase binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 28..62
NoneNo IPR availableCOILSCoilCoilcoord: 219..246
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 240..347
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1376..1432
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1724..1743
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1494..1537
NoneNo IPR availableCDDcd04020C2B_SLP_1-2-3-4coord: 1024..1164
e-value: 1.58495E-52
score: 183.293
NoneNo IPR availableCDDcd08521C2A_SLPcoord: 1565..1692
e-value: 6.01734E-39
score: 142.779
NoneNo IPR availableCDDcd08521C2A_SLPcoord: 882..1008
e-value: 4.13003E-53
score: 183.225
NoneNo IPR availableCDDcd15747FYVE_Slp3_4_5coord: 67..120
e-value: 4.35304E-15
score: 71.5615
IPR000008C2 domainPRINTSPR00360C2DOMAINcoord: 966..974
score: 29.97
coord: 913..925
score: 53.49
coord: 942..955
score: 44.1
IPR000008C2 domainSMARTSM00239C2_3ccoord: 521..626
e-value: 2.2E-14
score: 63.8
coord: 1746..1868
e-value: 5.9E-20
score: 82.3
coord: 896..1001
e-value: 1.9E-15
score: 67.3
coord: 1579..1684
e-value: 2.3E-16
score: 70.4
coord: 1036..1147
e-value: 3.3E-17
score: 73.2
coord: 677..782
e-value: 1.2E-10
score: 51.4
coord: 1239..1365
e-value: 0.0077
score: 25.4
IPR000008C2 domainGENE3D2.60.40.150coord: 873..1014
e-value: 1.3E-32
score: 112.0
coord: 494..646
e-value: 9.1E-26
score: 89.7
coord: 1560..1705
e-value: 7.3E-34
score: 116.0
IPR000008C2 domainGENE3D2.60.40.150coord: 1033..1178
e-value: 6.6E-26
score: 90.4
IPR000008C2 domainPFAMPF00168C2coord: 1580..1691
e-value: 6.3E-18
score: 64.9
coord: 1239..1335
e-value: 1.9E-6
score: 28.0
coord: 1745..1840
e-value: 1.3E-18
score: 67.0
coord: 895..1006
e-value: 7.0E-21
score: 74.4
coord: 676..772
e-value: 6.0E-15
score: 55.3
coord: 522..632
e-value: 7.1E-15
score: 55.1
coord: 1036..1130
e-value: 1.6E-18
score: 66.8
IPR000008C2 domainGENE3D2.60.40.150coord: 1714..1882
e-value: 5.3E-31
score: 106.9
coord: 1213..1378
e-value: 4.3E-13
score: 48.7
coord: 662..814
e-value: 7.1E-23
score: 80.5
IPR000008C2 domainPROSITEPS50004C2coord: 897..986
score: 18.078
IPR000008C2 domainPROSITEPS50004C2coord: 1036..1125
score: 16.954
IPR000008C2 domainPROSITEPS50004C2coord: 522..611
score: 13.816
IPR000008C2 domainPROSITEPS50004C2coord: 1746..1835
score: 15.178
IPR000008C2 domainPROSITEPS50004C2coord: 1240..1337
score: 8.888
IPR000008C2 domainPROSITEPS50004C2coord: 674..767
score: 14.216
IPR000008C2 domainPROSITEPS50004C2coord: 1580..1669
score: 16.968
IPR000008C2 domainSUPERFAMILY49562C2 domain (Calcium/lipid-binding domain, CaLB)coord: 502..637
IPR000008C2 domainSUPERFAMILY49562C2 domain (Calcium/lipid-binding domain, CaLB)coord: 1020..1132
IPR000008C2 domainSUPERFAMILY49562C2 domain (Calcium/lipid-binding domain, CaLB)coord: 660..806
IPR000008C2 domainSUPERFAMILY49562C2 domain (Calcium/lipid-binding domain, CaLB)coord: 874..1011
IPR000008C2 domainSUPERFAMILY49562C2 domain (Calcium/lipid-binding domain, CaLB)coord: 1230..1368
IPR000008C2 domainSUPERFAMILY49562C2 domain (Calcium/lipid-binding domain, CaLB)coord: 1558..1695
IPR000008C2 domainSUPERFAMILY49562C2 domain (Calcium/lipid-binding domain, CaLB)coord: 1705..1716
coord: 1743..1873
IPR001565SynaptotagminPRINTSPR00399SYNAPTOTAGMNcoord: 899..912
score: 37.61
coord: 884..899
score: 25.92
coord: 977..987
score: 43.85
coord: 957..972
score: 22.79
IPR011011Zinc finger, FYVE/PHD-typePFAMPF02318FYVE_2coord: 15..135
e-value: 5.7E-23
score: 81.3
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 15..135
IPR017455Zinc finger, FYVE-relatedPROSITEPS50178ZF_FYVEcoord: 69..123
score: 8.66
IPR010911Rab-binding domainPROSITEPS50916RABBDcoord: 10..135
score: 12.962

Blast
BLAST of TCONS_00008147-protein vs. Swiss-Prot (Human)
Match: SYTL4 (Synaptotagmin-like protein 4 OS=Homo sapiens GN=SYTL4 PE=1 SV=2)

HSP 1 Score: 233.802 bits (595), Expect = 1.141e-64
Identity = 130/336 (38.69%), Postives = 196/336 (58.33%), Query Frame = 0
Query:  860 STGSMLSLYSMAGGEHGNLTITGELLFSVKYDDLSGIFSINIEKAKGLAAVDAKKMTSDPYVKVYLLPDKNKTSKKKTMHRRKTINPIWNETIKYKLSKEDLLQKTLQLTIWNHDRLGKNDCLGEVQLNMKQYANTNKLNEEQPVWYTLQSPAPVVGGGADDNIGELVLGLKY------------------DNEQLIVTVKEAKGLTSLTPNKMPNPFVKCYLLPDKSRKSKRKTGVQKKTNNPMWNEKFTYKHVSIDDLNTRAIEITVWDYDS-SAHQFLGGVRLGLPEGDE-----PWKDSFKDEVHLWESMMNHLGILAEYTIPLRKTMTSVK 1171
            + GSM+S+YS AG + GN+ +TG + FS+KY+  +    +++++   LA  D  K  S+PYVK YLLPDK++  K+KT  +R TINP+++ET++Y++ +  L Q+TLQ ++W+H R G+N  LGE ++ M  +    KL+   P+   + + +P    G   + GELV+ LKY                  +  +L V +KEAK LT+       + FVK YLLP +++ SKRKT V KKT NP +N  F Y  V ++DL    +E+TVWD +  +++ FLGGVRLG+  G        W DS  +EV LW+ M  + G  AE T+ LR +M   K
Sbjct:  337 TIGSMMSIYSEAG-DFGNIFVTGRIAFSLKYEQQTQSLVVHVKECHQLAYADEAKKRSNPYVKTYLLPDKSRQGKRKTSIKRDTINPLYDETLRYEIPESLLAQRTLQFSVWHHGRFGRNTFLGEAEIQMDSWKLDKKLDHCLPLHGKISAESPT---GLPSHKGELVVSLKYIPASKTPVGGDRKKSKGGEGGELQVWIKEAKNLTAAKAGGTSDSFVKGYLLPMRNKASKRKTPVMKKTLNPHYNHTFVYNGVRLEDLQHMCLELTVWDREPLASNDFLGGVRLGVGTGISNGEVVDWMDSTGEEVSLWQKMRQYPGSWAEGTLQLRSSMAKQK 668          

HSP 2 Score: 197.208 bits (500), Expect = 1.912e-52
Identity = 121/340 (35.59%), Postives = 178/340 (52.35%), Query Frame = 0
Query: 1545 SMTSIYSTDSANVYGQVPIRGEVQFGLKYDTTTSLFEVHVFKAKGIAAVDTKKETTDPYCKVYLLPDRTKAGKKKTRTRKKTLNPEWDEILEFKINIRDLRLRTLSLTIWHQEKLGRNVFLGEVMQDMSTL-LDNGSLYGTPTTNWYDLQEKAQAPTRELYRGELYISLCFEDDNFKGVREDTEDEKKKKKKKKKKDMKSNGRVNIHILKATDLPAADKDGASDPFCKVYLLPMKQSKHKRKTPVIRDTLCPVWDYRTEYD-IDYEDLGDHGIEFSVWDWDRGNSNDLLGCARIGPGN--NSGE---WDDANGVEIEAWRHMIDNPNVWKEFKIKLRSEL 1877
            SM SIYS   A  +G + + G + F LKY+  T    VHV +   +A  D  K+ ++PY K YLLPD+++ GK+KT  ++ T+NP +DE L ++I    L  RTL  ++WH  + GRN FLGE    M +  LD    +  P       +     P+   ++GEL +SL +   +   V  D          +KK      G + + I +A +L AA   G SD F K YLLPM+    KRKTPV++ TL P +++   Y+ +  EDL    +E +VWD +   SND LG  R+G G   ++GE   W D+ G E+  W+ M   P  W E  ++LRS +
Sbjct:  340 SMMSIYS--EAGDFGNIFVTGRIAFSLKYEQQTQSLVVHVKECHQLAYADEAKKRSNPYVKTYLLPDKSRQGKRKTSIKRDTINPLYDETLRYEIPESLLAQRTLQFSVWHHGRFGRNTFLGEAEIQMDSWKLDKKLDHCLPLHGKISAESPTGLPS---HKGELVVSLKYIPASKTPVGGD----------RKKSKGGEGGELQVWIKEAKNLTAAKAGGTSDSFVKGYLLPMRNKASKRKTPVMKKTLNPHYNHTFVYNGVRLEDLQHMCLELTVWDREPLASNDFLGGVRLGVGTGISNGEVVDWMDSTGEEVSLWQKMRQYPGSWAEGTLQLRSSM 664          

HSP 3 Score: 162.155 bits (409), Expect = 8.511e-41
Identity = 111/337 (32.94%), Postives = 167/337 (49.55%), Query Frame = 0
Query:  488 SIGSDYSDEEDIAETVQVAGELLLGFRYVPKEKLFEVQVHKAKDLIIGDSIDNSTDPYVKIYLRPETKRSAKRKTKVKKKTLNPDFDEILSFKLEYDQLISRTVAASVWHSSFTQKNKCLGEALISIDEYLESGFSFDDPTPQWYTLKGRTIKRDQVEFC---GDLVANIWFKAPGFSPNEELGKKANPVKGS-LEVHCIRAQNLKALHEGGFSNPFCKMVLISKNSKHDKFKTHHIKGTIDPYWDKQFSFTNVQWVDLQDAVLQFSVWDVEKGSSHVLLGGARLGLGR--HDGQI---HDSFGEEVEIWQKVLDYPNESKEYFIPLRSTLDSVKQK 815
            S+ S YS+  D    + V G +    +Y  + +   V V +   L   D     ++PYVK YL P+  R  KRKT +K+ T+NP +DE L +++    L  RT+  SVWH     +N  LGEA I +D +       D        L G+             G+LV ++ +     +P     KK+   +G  L+V    A+NL A   GG S+ F K  L+   +K  K KT  +K T++P+++  F +  V+  DLQ   L+ +VWD E  +S+  LGG RLG+G    +G++    DS GEEV +WQK+  YP    E  + LRS++   KQK
Sbjct:  340 SMMSIYSEAGDFG-NIFVTGRIAFSLKYEQQTQSLVVHVKECHQLAYADEAKKRSNPYVKTYLLPDKSRQGKRKTSIKRDTINPLYDETLRYEIPESLLAQRTLQFSVWHHGRFGRNTFLGEAEIQMDSW-----KLDKKLDHCLPLHGKISAESPTGLPSHKGELVVSLKYIPASKTPVGGDRKKSKGGEGGELQVWIKEAKNLTAAKAGGTSDSFVKGYLLPMRNKASKRKTPVMKKTLNPHYNHTFVYNGVRLEDLQHMCLELTVWDREPLASNDFLGGVRLGVGTGISNGEVVDWMDSTGEEVSLWQKMRQYPGSWAEGTLQLRSSM--AKQK 668          

HSP 4 Score: 85.5001 bits (210), Expect = 1.383e-16
Identity = 41/118 (34.75%), Postives = 66/118 (55.93%), Query Frame = 0
Query:   16 FTDQERRLILEVVARDEDVLRQEKSRIEHLQDELQQLEEKGVPEEDEATCGRICRRCRSPLGLVLNSGALCVSCSKTVCKDCRVETGIPSEDNTIPSWICTVCGKIREIRAESGAWFY 133
             +++E+ LIL V+ RDE+V + ++ RI  L++EL +++ KG     +    R C RC+  LG +      C  C+  VC+DCR++     E N   +W C VC K  E++  +G WFY
Sbjct:   10 LSEEEKDLILSVLQRDEEVRKADEKRIRRLKNELLEIKRKGAKRGSQHYSDRTCARCQESLGRLSPKTNTCRGCNHLVCRDCRIQ-----ESNG--TWRCKVCAKEIELKKATGDWFY 120          
The following BLAST results are available for this feature:
BLAST of TCONS_00008147-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SYTL41.141e-6438.69Synaptotagmin-like protein 4 OS=Homo sapiens GN=SY... [more]
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