TCONS_00008032-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00008032-protein
Unique NameTCONS_00008032-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length207

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00008032-protein ID=TCONS_00008032-protein|Name=TCONS_00008032-protein|organism=Clytia hemisphaerica|type=polypeptide|length=207bp
RKQKSNKQINKLHSIFHVMTTNQVSTLVPPIKDLTLEDDSKKNPFKVPLD
HDIFALRDKEKQKKKQERQEQLKLKVHEKTTYTSRVNARTKAMIRPAGDT
DDDLSGEDENNDGTMVIRDDPDFVLSTTKDRHVEKEHLDDYIAKKREMFL
VQYSLGVKRDEMRKLEEVAQAEERKLELAEKYLEEDXECPGWKTFKKEAN
TAELGQK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_004522XLOC_004522Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00008032TCONS_00008032Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR025252DUF4200
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 155..186
NoneNo IPR availableCOILSCoilCoilcoord: 188..188
IPR025252Domain of unknown function DUF4200PFAMPF13863DUF4200coord: 141..187
e-value: 4.7E-10
score: 39.8

Blast
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BLAST of TCONS_00008032-protein vs. Swiss-Prot (Human)
Match: CP100 (Cilia- and flagella-associated protein 100 OS=Homo sapiens GN=CFAP100 PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 2.823e-28
Identity = 64/150 (42.67%), Postives = 96/150 (64.00%), Query Frame = 0 
Query:   39 DSKKNPFKVPLDHDIFALRDKEKQKKKQERQEQLKLKVHEKTTYTSRVNARTKAMIRPAG--DTDDDLSGEDENNDGTMVIRDDPDFVLSTTKDRHVEKEHLDDYIAKKREMFLVQYSLGVKRDEMRKLEEVAQAEERKLELAEKYLEED 186
            D   NPF +  D D F LRD+E+ K   ERQ+Q  ++VH+K TY+S+V+A+  ++ R     D  +DL    E  +     RD   + L+ TK+++VE E++  YI +KR+MFL+QY+L VKR E+++LE +A  EE +LE AEK LE+D
Sbjct:   48 DPSANPFHLSGDVDFFLLRDQERNKALSERQQQKTMRVHQKMTYSSKVSAKHTSLRRQLQLEDKQEDLEARAEA-EHQRAFRDYTTWKLTLTKEKNVEPENMSGYIKQKRQMFLLQYALDVKRREIQRLETLATKEEARLERAEKSLEKD 196
The following BLAST results are available for this feature:
BLAST of TCONS_00008032-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CP1002.823e-2842.67Cilia- and flagella-associated protein 100 OS=Homo... [more]
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