TCONS_00008001-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00008001-protein
Unique NameTCONS_00008001-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1299

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00008001-protein ID=TCONS_00008001-protein|Name=TCONS_00008001-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1299bp
MNLNLLVFVFLGIVLALGADNYQIVLVQKKDSFKVSCNYDKYQLSKNLTF
PSLNLTKDGIPIISILFTNESYEKKLFDERFEWTGDDKTLSFVLKSLETA
DSGDYVCVSKDGNNIVTKSEVTKLTVLIPPILALQPPNTNLDIFKGDFVN
IRCKVTPQPLENLTISWTLGNNVFTRDTFNERIYEMNRLTCSAKNRAGVS
AKTVFITVKAPEPSVVLNFRYTKSPPSKSKQSYTLYWNKSNKIGKSIITH
YQIYLDHVFHANVSKDFELKHLIPDLNIFHQHSFSISACNVHGCSAFERI
DSEATPFLNLTSRYITSSSLKIDFTANKNQNQVTYDQICITMVTRCDDEK
QCKQVVNDSHTEVEFKSLKPYCLYSFVGYYKTLTDPKTITTPIIDVSTSP
SAPDGVEDMNVVYDNNFSLMQLFWKKPTKLNDKRVNYSVSYVPYNEPDHF
QPTNLYSDFADPTTAREYEHILTGLKGSTIYLIKVKAKNSVGFNIVEIVR
ETDEKTPSAPTNLKAISSTDTTITIQWDFETSVNRYRIRYEEDSEKNLDF
IDTPTNERILTGLKAGRNYSISVSAITIKRRTQEELFGPPATRWFQTALK
PGTQMKEERSLLIAVILVMVFLVLSSILFAFCYCHRKSLGAGGTSKFYLD
SPEGVISTPFTFGLKMSLRRAETSKRQPMTLEEFEKHVAELHANTDYLFS
EEYASLGPNHPEKNEVTYENSKTEANRLKNRYPDIVAYDQSRVRLMSLEG
VVGSNYINANYVDGYNSPAQFIATQAPLTHTVSDFWRMCWERKSHIIVML
TNLFERGRKKCDQYWPNSGKESYKNYDVTLIETSQYANYSIRKLKLVRTS
ITADERRRGATEKVSDGTEGPEERMIFQYHFEEWPDFGTPNDRGSVISFI
LHCREHEETHPGPPIIHCSAGVGRTGTYIMLDSLMRRFDHTKDVEVFSSL
KKLRKQRNYLVQQECQYIFVHDTILDYMMSGSTLIPVETLEETVNSKEFF
QQIDHQWNILEKQKISPHLQVLCHRTYNTNKNRDHNVVPVDSHRVRISVR
SAIEGTDYINASFFDSYHHRNSYIVTQHPLTNTLEDFWRMIWEHNSLIVI
NLTQHEECQEGDYPDYIPIESEQTFGHFHLRIDEERIENNYTCRKITLRN
DETREDQYNSNERQIYHYHFKEWATDFYPRNAFLFELLTDVVQCQSKVRN
WYPRRRSFVQNRDPEPPITIHCSCGSGRSAIFALLLSFKEQLESSYRFVD
VYSTVKSMMTRRPFLLQNKGQYEFLHKALLALKVYLNTKPRSNTLELEL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_004510XLOC_004510Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00008001TCONS_00008001Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000242PTPase_domain
IPR003595Tyr_Pase_cat
IPR003961FN3_dom
IPR003599Ig_sub
IPR013783Ig-like_fold
IPR013106Ig_V-set
IPR029021Prot-tyrosine_phosphatase-like
IPR016130Tyr_Pase_AS
IPR000387TYR_PHOSPHATASE_dom
IPR007110Ig-like_dom
Vocabulary: Biological Process
TermDefinition
GO:0006470protein dephosphorylation
GO:0016311dephosphorylation
Vocabulary: Molecular Function
TermDefinition
GO:0004725protein tyrosine phosphatase activity
GO:0005515protein binding
GO:0016791phosphatase activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016311 dephosphorylation
biological_process GO:0006470 protein dephosphorylation
molecular_function GO:0016791 phosphatase activity
molecular_function GO:0005515 protein binding
molecular_function GO:0004725 protein tyrosine phosphatase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000242PTP type protein phosphatasePRINTSPR00700PRTYPHPHTASEcoord: 913..931
score: 64.71
coord: 874..891
score: 41.99
coord: 771..791
score: 59.89
coord: 755..762
score: 64.78
coord: 960..970
score: 51.28
coord: 944..959
score: 31.73
IPR000242PTP type protein phosphataseSMARTSM00194PTPc_3coord: 698..979
e-value: 4.0E-111
score: 385.1
coord: 1002..1284
e-value: 1.3E-57
score: 207.4
IPR000242PTP type protein phosphatasePFAMPF00102Y_phosphatasecoord: 1028..1280
e-value: 2.0E-54
score: 184.6
coord: 726..975
e-value: 3.8E-75
score: 252.4
IPR000242PTP type protein phosphatasePROSITEPS50055TYR_PHOSPHATASE_PTPcoord: 1003..1282
score: 39.018
IPR000242PTP type protein phosphatasePROSITEPS50055TYR_PHOSPHATASE_PTPcoord: 699..977
score: 52.474
IPR003595Protein-tyrosine phosphatase, catalyticSMARTSM00404ptp_7coord: 1164..1281
e-value: 2.9E-19
score: 80.0
coord: 875..976
e-value: 1.5E-34
score: 130.8
IPR003961Fibronectin type IIISMARTSM00060FN3_2coord: 507..582
e-value: 4.4E-8
score: 42.8
coord: 403..494
e-value: 0.0055
score: 25.9
coord: 213..295
e-value: 4.8
score: 14.3
IPR003961Fibronectin type IIIPFAMPF00041fn3coord: 508..577
e-value: 7.4E-10
score: 39.0
IPR003961Fibronectin type IIIPROSITEPS50853FN3coord: 215..308
score: 8.142
IPR003961Fibronectin type IIIPROSITEPS50853FN3coord: 402..505
score: 11.795
IPR003961Fibronectin type IIIPROSITEPS50853FN3coord: 509..602
score: 13.555
IPR003961Fibronectin type IIICDDcd00063FN3coord: 400..492
e-value: 1.71731E-6
score: 46.7207
IPR003961Fibronectin type IIICDDcd00063FN3coord: 507..577
e-value: 1.25128E-9
score: 55.9655
IPR003961Fibronectin type IIISUPERFAMILY49265Fibronectin type IIIcoord: 308..494
IPR003961Fibronectin type IIISUPERFAMILY49265Fibronectin type IIIcoord: 189..297
IPR003961Fibronectin type IIISUPERFAMILY49265Fibronectin type IIIcoord: 469..579
IPR003599Immunoglobulin subtypeSMARTSM00409IG_3ccoord: 138..209
e-value: 110.0
score: 2.6
coord: 22..127
e-value: 0.0058
score: 25.9
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 146..201
e-value: 5.3E-4
score: 19.4
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 202..303
e-value: 1.9E-7
score: 30.6
coord: 383..497
e-value: 1.5E-8
score: 34.2
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 20..145
e-value: 2.1E-11
score: 43.5
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 304..379
e-value: 7.2E-4
score: 19.3
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 500..605
e-value: 2.8E-13
score: 49.5
IPR013106Immunoglobulin V-set domainPFAMPF07686V-setcoord: 26..127
e-value: 1.1E-6
score: 28.7
IPR029021Protein-tyrosine phosphatase-likeGENE3D3.90.190.10coord: 671..984
e-value: 7.7E-102
score: 339.8
IPR029021Protein-tyrosine phosphatase-likeGENE3D3.90.190.10coord: 988..1289
e-value: 7.2E-65
score: 218.6
IPR029021Protein-tyrosine phosphatase-likeSUPERFAMILY52799(Phosphotyrosine protein) phosphatases IIcoord: 677..978
IPR029021Protein-tyrosine phosphatase-likeSUPERFAMILY52799(Phosphotyrosine protein) phosphatases IIcoord: 985..1281
IPR016130Protein-tyrosine phosphatase, active sitePROSITEPS00383TYR_PHOSPHATASE_1coord: 916..926
IPR016130Protein-tyrosine phosphatase, active sitePROSITEPS00383TYR_PHOSPHATASE_1coord: 1220..1230
IPR000387Tyrosine specific protein phosphatases domainPROSITEPS50056TYR_PHOSPHATASE_2coord: 1199..1273
score: 14.533
IPR000387Tyrosine specific protein phosphatases domainPROSITEPS50056TYR_PHOSPHATASE_2coord: 894..968
score: 17.599
IPR007110Immunoglobulin-like domainPROSITEPS50835IG_LIKEcoord: 129..207
score: 7.794
IPR007110Immunoglobulin-like domainSUPERFAMILY48726Immunoglobulincoord: 129..211
IPR007110Immunoglobulin-like domainSUPERFAMILY48726Immunoglobulincoord: 24..130
NoneNo IPR availableCDDcd00047PTPccoord: 729..976
e-value: 1.04401E-98
score: 314.524
NoneNo IPR availableCDDcd00047PTPccoord: 1031..1280
e-value: 3.16996E-66
score: 223.617

Blast
BLAST of TCONS_00008001-protein vs. Swiss-Prot (Human)
Match: PTPRD (Receptor-type tyrosine-protein phosphatase delta OS=Homo sapiens GN=PTPRD PE=1 SV=2)

HSP 1 Score: 404.831 bits (1039), Expect = 1.971e-117
Identity = 234/727 (32.19%), Postives = 364/727 (50.07%), Query Frame = 0
Query:  563 LKAGRNYSISVSAITIKRRTQEELFGPPATRWFQTALKPGTQMKEERSLLIAVILVMVFLVLSSILFAFCYCHRKSLGAGGTSKFYLDS---PEGVISTPFTFGLKMSLRRAETSKRQPMTLEEFEKHVAELHANTDYLFSEEYASLGPNHPEKNEVTYENSKTEANRLKNRYPDIVAYDQSRVRLMSLEGVVGSNYINANYVDGYNSPAQFIATQAPLTHTVSDFWRMCWERKSHIIVMLTNLFERGRKKCDQYWPNSGKESYKNYDVTLIETSQYANYSIRKLKLVRTSITADERRRGATEKVSDGTEGPEERMIFQYHFEEWPDFGTPNDRGSVISFILHCREHEETHPGPPIIHCSAGVGRTGTYIMLDSLMRRFDHTKDVEVFSSLKKLRKQRNYLVQQECQYIFVHDTILDYMMSGSTLIPVETLEE------TVNSKEFFQQIDHQWNILEKQKISPHLQVLCHRTYNTNKNRDHNVVPVDSHRVRISVRSAIEGTDYINASFFDSYHHRNSYIVTQHPLTNTLEDFWRMIWEHNSLIVINLTQHEECQEGDYPDYIPIESEQTFGHFHLRIDEERIENNYTCRKITLRNDETREDQYNSNERQIYHYHFKEWATDFYPRNAFLFELLTDVVQCQSKVRNWYPRRRSFVQNRDPEPPITIHCSCGSGRSAIFALLLSFKEQLESSYRFVDVYSTVKSMMTRRPFLLQNKGQYEFLHKALL 1280
            L++G+ Y   V A+     ++     P +       L P     EE  L+  V  V+  + +  I+ A     RK   +        ++   P    + P     +++ +    +   P+ + E   H+  L AN +  FS+EY S+ P      + T+E+S  E N+ KNRY +++AYD SRV L ++EG+ GS+Y+NANY+DGY     +IATQ  L  T  DFWRM WE++S  +VM+T L ER R KCDQYWP+ G E++    VTL++T + A Y +R   L +          G++EK          R + Q+ F  WPD G P      ++F+   +       GP ++HCSAGVGRTG +I++D+++ R  H K V+++  +  +R QRNY+VQ E QYIF+HD +L+ +  G+T +P   L         + + E    ++ ++  L   K      +  +   N  KNR  N++P +S RV +     +EG+DYINASF D Y  + +YI TQ PL  T EDFWRM+WEHNS IV+ LT+  E        Y P E    + +F +    E     Y  R+  +       D  +   R +  + F +W     P++    E   D +    K +        F Q+     PI++HCS G GR+ +F  L    E++      VD++ TVK + T+RP ++Q + QY+F ++A L
Sbjct: 1219 LQSGQEYVFFVLAVMEHAESKMYATSPYSDPVVSMDLDPQPITDEEEGLIWVVGPVLAVVFIICIVIAILLYKRKRAESDSRKSSIPNNKEIPSHHPTDPVEL-RRLNFQTPGMASHPPIPILELADHIERLKANDNLKFSQEYESIDPGQ----QFTWEHSNLEVNKPKNRYANVIAYDHSRVLLSAIEGIPGSDYVNANYIDGYRKQNAYIATQGSLPETFGDFWRMIWEQRSATVVMMTKLEERSRVKCDQYWPSRGTETHGLVQVTLLDTVELATYCVRTFALYKN---------GSSEK----------REVRQFQFTAWPDHGVPEHPTPFLAFLRRVKTCNPPDAGPMVVHCSAGVGRTGCFIVIDAMLERIKHEKTVDIYGHVTLMRAQRNYMVQTEDQYIFIHDALLEAVTCGNTEVPARNLYAYIQKLTQIETGENVTGMELEFKRLASSKAHTSRFISANLPCNKFKNRLVNIMPYESTRVCLQPIRGVEGSDYINASFIDGYRQQKAYIATQGPLAETTEDFWRMLWEHNSTIVVMLTKLREMGREKCHQYWPAERSARYQYFVVDPMAEYNMPQYILREFKV------TDARDGQSRTVRQFQFTDWPEQGVPKSG---EGFIDFIGQVHKTKE------QFGQDG----PISVHCSAGVGRTGVFITLSIVLERMRYE-GVVDIFQTVKMLRTQRPAMVQTEDQYQFSYRAAL 1901          

HSP 2 Score: 194.126 bits (492), Expect = 9.980e-50
Identity = 100/257 (38.91%), Postives = 141/257 (54.86%), Query Frame = 0
Query:  726 NRLKNRYPDIVAYDQSRVRLMSLEGVVGSNYINANYVDGYNSPAQFIATQAPLTHTVSDFWRMCWERKSHIIVMLTNLFERGRKKCDQYWPNSGKESYKNYDVTLIETSQYANYSIRKLKLVRTSITADERRRGATEKVSDGTEGPEERMIFQYHFEEWPDFGTPNDRGSVISFI--LHCREHEETHPGPPIIHCSAGVGRTGTYIMLDSLMRRFDHTKDVEVFSSLKKLRKQRNYLVQQECQYIFVHDTILDYMMS 980
            N+ KNR  +I+ Y+ +RV L  + GV GS+YINA+++DGY     +IATQ PL  T  DFWRM WE  S I+VMLT L E GR+KC QYWP      Y+ + V  +       Y +R+ K                  V+D  +G + R + Q+ F +WP+ G P      I FI  +H  + +    GP  +HCSAGVGRTG +I L  ++ R  +   V++F ++K LR QR  +VQ E QY F +   L+Y+ S
Sbjct: 1669 NKFKNRLVNIMPYESTRVCLQPIRGVEGSDYINASFIDGYRQQKAYIATQGPLAETTEDFWRMLWEHNSTIVVMLTKLREMGREKCHQYWPAERSARYQYFVVDPMAEYNMPQYILREFK------------------VTDARDG-QSRTVRQFQFTDWPEQGVPKSGEGFIDFIGQVHKTKEQFGQDGPISVHCSAGVGRTGVFITLSIVLERMRYEGVVDIFQTVKMLRTQRPAMVQTEDQYQFSYRAALEYLGS 1906          

HSP 3 Score: 129.413 bits (324), Expect = 6.025e-30
Identity = 80/263 (30.42%), Postives = 120/263 (45.63%), Query Frame = 0
Query: 1028 NTNKNRDHNVVPVDSHRVRISVRSAIEGTDYINASFFDSYHHRNSYIVTQHPLTNTLEDFWRMIWEHNSLIVINLTQHEECQEGDYPDYIPIESEQTFGHFHLRIDEERIENNYTCRKITLRNDETREDQYNSNERQIYHYHFKEWATDFYPRNAFLF-ELLTDVVQCQSKVRNWYPRRRSFVQNRDPEPPITIHCSCGSGRSAIFALLLSFKEQLESSYRFVDVYSTVKSMMTRRPFLLQNKGQYEFLHKALLALKVYLNTK 1289
            N  KNR  NV+  D  RV +S    I G+DY+NA++ D Y  +N+YI TQ  L  T  DFWRMIWE  S  V+ +T+ EE        Y P    +T G   + + +      Y  R   L  + + E      +R++  + F  W     P +   F   L  V  C                N     P+ +HCS G GR+  F ++ +  E+++   + VD+Y  V  M  +R +++Q + QY F+H ALL      NT+
Sbjct: 1380 NKPKNRYANVIAYDHSRVLLSAIEGIPGSDYVNANYIDGYRKQNAYIATQGSLPETFGDFWRMIWEQRSATVVMMTKLEERSRVKCDQYWPSRGTETHGLVQVTLLDTVELATYCVRTFALYKNGSSE------KREVRQFQFTAWPDHGVPEHPTPFLAFLRRVKTC----------------NPPDAGPMVVHCSAGVGRTGCFIVIDAMLERIKHE-KTVDIYGHVTLMRAQRNYMVQTEDQYIFIHDALLEAVTCGNTE 1619          
The following BLAST results are available for this feature:
BLAST of TCONS_00008001-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PTPRD1.971e-11732.19Receptor-type tyrosine-protein phosphatase delta O... [more]
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