TCONS_00007821-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00007821-protein
Unique NameTCONS_00007821-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length389

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00007821-protein ID=TCONS_00007821-protein|Name=TCONS_00007821-protein|organism=Clytia hemisphaerica|type=polypeptide|length=389bp
NIFLKMNENTSGIVETVDQETIMGDIEVKEPGIHDEGKEIPFPEYRAPDE
EEEDPKWPEDSNLQSLIYKLPDDKLPIIYDDIYNITFMGLQKLHPFDSEK
WGRIVDILSNDGCKAFQKLRSMVCKPREATDDILAVVHTQDYLDSLKWSS
KVARVTEVLPIAILPNFVVQSKLLRKLRTQTGGTVLAAYAAYRRGWSINI
GGGFHHCYSTDGGGFCAYADITMAIKMLMEKVDLDRIMIVDLDAHQGNGH
ERDFMGNEKVYIMDVYNRSIYPQDEYAKGAIKKKCPIVPGLKTDPYMEVV
TYNYQKALEEFKPQFILYNAGTDILEGDPLGMLNISEEGVIQRDEFVFKL
AREQQIPIAMVTSGGYQRSTANVIARSIINLHLHDLIPR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_004439XLOC_004439Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00007821TCONS_00007821Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000286His_deacetylse
IPR023801His_deacetylse_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000286Histone deacetylase superfamilyPRINTSPR01270HDASUPERcoord: 313..323
score: 35.66
coord: 202..225
score: 36.7
coord: 236..251
score: 47.24
IPR023801Histone deacetylase domainPFAMPF00850Hist_deacetylcoord: 97..376
e-value: 1.7E-49
score: 168.9
IPR023801Histone deacetylase domainGENE3D3.40.800.20coord: 73..388
e-value: 3.8E-61
score: 206.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 33..58
NoneNo IPR availableCDDcd09993HDAC_classIVcoord: 94..381
e-value: 5.30402E-115
score: 338.318
NoneNo IPR availableSUPERFAMILY52768Arginase/deacetylasecoord: 73..384

Blast
[Close]
BLAST of TCONS_00007821-protein vs. Swiss-Prot (Human)
Match: HDA11 (Histone deacetylase 11 OS=Homo sapiens GN=HDAC11 PE=1 SV=1)

HSP 1 Score: 379.022 bits (972), Expect = 8.056e-131
Identity = 178/317 (56.15%), Postives = 238/317 (75.08%), Query Frame = 0 
Query:   66 LIYKLPDDKLPIIYDDIYNITFMGLQKLHPFDSEKWGRIVDILSNDGCKAFQKLRSMVCKPREATDDILAVVHTQDYLDSLKWSSKVARVTEVLPIAILPNFVVQSKLLRKLRTQTGGTVLAAYAAYRRGWSINIGGGFHHCYSTDGGGFCAYADITMAIKMLMEKVD-LDRIMIVDLDAHQGNGHERDFMGNEKVYIMDVYNRSIYPQDEYAKGAIKKKCPIVPGLKTDPYMEVVTYNYQKALEEFKPQFILYNAGTDILEGDPLGMLNISEEGVIQRDEFVFKLAREQQIPIAMVTSGGYQRSTANVIARSIINL 381
            L   +P+ + PI+Y   YNITFMGL+KLHPFD+ KWG++++ L  +   +     SM+ + REA+++ L VVHT+ YL+ LKWS  VA +TE+ P+  LPNF+VQ K+LR LRTQTGGT++A   A  RGW+IN+GGGFHHC S  GGGFCAYADIT+AIK L E+V+ + R  I+DLDAHQGNGHERDFM +++VYIMDVYNR IYP D +AK AI++K  +  G + D Y++ V  N +K+L+E  P  ++YNAGTDILEGD LG L+IS  G+++RDE VF++ R +++PI MVTSGGYQ+ TA +IA SI+NL
Sbjct:    7 LYQHVPETRWPIVYSPRYNITFMGLEKLHPFDAGKWGKVINFLKEEKLLS----DSMLVEAREASEEDLLVVHTRRYLNELKWSFAVATITEIPPVIFLPNFLVQRKVLRPLRTQTGGTIMAGKLAVERGWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRATIIDLDAHQGNGHERDFMDDKRVYIMDVYNRHIYPGDRFAKQAIRRKVELEWGTEDDEYLDKVERNIKKSLQEHLPDVVVYNAGTDILEGDRLGGLSISPAGIVKRDELVFRMVRGRRVPILMVTSGGYQKRTARIIADSILNL 319
The following BLAST results are available for this feature:
BLAST of TCONS_00007821-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
HDA118.056e-13156.15Histone deacetylase 11 OS=Homo sapiens GN=HDAC11 P... [more]
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