TCONS_00007715-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00007715-protein
Unique NameTCONS_00007715-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length411

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00007715-protein ID=TCONS_00007715-protein|Name=TCONS_00007715-protein|organism=Clytia hemisphaerica|type=polypeptide|length=411bp
MDFPSYNPPPPPPPPSQHQHQQQPNPYYQPPPVPNTGYGYEFNQINYSGP
PPQGNYNAYQQPPQYNQQYNQQQQNQQYGHSQYQHRQQYNNRTNNHNNSN
DQRQRQQQQTGQGSVRCEPCERDFNSQDALFKHQKQHVKCEAEGCSYTAS
SKAVKLHFIQTHEEGKFRIVLTTPEEIKKWREERRKNWPSRSKVEQKKQQ
QSENKSQGIAIETKEFAYRDRPERKRGNQGVREKTNSKKQRTDVNNNNSE
MKKDGTISSNATGGLSLLQSYGDDDEEMVENEADKVETSKNNTELSGNAL
LEEGELLATDDGETDANNKQRGSKHRDNRRNRKHNGRDGKKNQNAKRQQK
YEPPKRTSLLEMLLAKEIRHERNVILQCVRYIVQKNFFQNQDQESGEGIE
SGCTKEAIATR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_004375XLOC_004375Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00007715TCONS_00007715Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR019496NUFIP1_cons_dom
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 138..162
e-value: 16.0
score: 11.5
coord: 115..137
e-value: 0.12
score: 21.5
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 117..137
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 115..142
score: 9.91
NoneNo IPR availableGENE3D3.30.160.60coord: 98..214
e-value: 6.2E-4
score: 19.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 182..356
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..119
IPR019496Nuclear fragile X mental retardation-interacting protein 1, conserved domainPFAMPF10453NUFIP1coord: 160..208
e-value: 4.7E-17
score: 61.5

Blast
[Close]
BLAST of TCONS_00007715-protein vs. Swiss-Prot (Human)
Match: NUFP1 (Nuclear fragile X mental retardation-interacting protein 1 OS=Homo sapiens GN=NUFIP1 PE=1 SV=2)

HSP 1 Score: 134.035 bits (336), Expect = 1.184e-34
Identity = 99/310 (31.94%), Postives = 156/310 (50.32%), Query Frame = 0 
Query:  117 CEPCERDFNSQDALFKHQKQHVKCEAEGCSYTASSKAVKLHFIQTHEEGKFRIVLTTPEEIKKWREERRKNWPSRSKVEQKKQQQSENKSQGIAIETKEFAYRDRPERKRGNQGVRE-------KTNSKKQR--TDVNNNNSEMKKDGTISSNATGGLSLLQSYGDDDEE------MVENEADKVETSKNNT--ELSGN-------ALLEEGELLA----TDDGETDANNKQRGSKHRDNRRNRKHNGRDGKKNQNAKRQQKY-------EPPKRTS---LLEMLLAKEIRHERNVILQCVRYIVQKNFF 388
            C+ C+R F +Q+   KH  +H KC    CS+TA  K V+ H+   H  G  +I L TPEEI +WREERRKN+P+ + +E+KK+ + E + +G  + T ++       R      +R        K ++ +QR  T   ++  ++K +G   +NA     L+ S  + D+E      ++  E      S  ++   LSG+        +  E ++LA     D     + ++   +  R+    +  N +   +  N KR++ Y       EP  RT    LLEMLLA +IRHERNVILQCVRYI++K+FF
Sbjct:  176 CDTCDRGFKNQEKYDKHMSEHTKCPELDCSFTAHEKIVQFHWRNMHAPGMKKIKLDTPEEIARWREERRKNYPTLANIERKKKLKLEKEKRGAVLTTTQYGKMKGMSRHSQMAKIRSPGKNHKWKNDNSRQRAVTGSGSHLCDLKLEGPPEANADPLGVLINSDSESDKEEKPQHSVIPKEVTPALCSLMSSYGSLSGSESEPEETPIKTEADVLAENQVLDSSAPKSPSQDVKATVRNFSEAKSENRKKSFEKTNPKRKKDYHNYQTLFEP--RTHHPYLLEMLLAPDIRHERNVILQCVRYIIKKDFF 483
The following BLAST results are available for this feature:
BLAST of TCONS_00007715-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
NUFP11.184e-3431.94Nuclear fragile X mental retardation-interacting p... [more]
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