TCONS_00007595-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00007595-protein
Unique NameTCONS_00007595-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length649

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00007595-protein ID=TCONS_00007595-protein|Name=TCONS_00007595-protein|organism=Clytia hemisphaerica|type=polypeptide|length=649bp
MSEFVEDDDNDKVRAAIVARYERGPEGPIEPWEDASFIVYQVCDRYGFLH
KNPLPQYEKDEKVMELERERAKKWLKMIAGWETYFIDNKVSEKLRRRVYK
GIPDSIRGSAWKMMLNIDHVAKAGVYTRFKNIALENSPDIRQIDLDVNRT
YRDHIMFRDRFSIKQQALFNVLAAYSLYNTDVGYCQGMSGITALLLMYMN
EEDAFWALSELLNDKKHAMHGLFIPGFPKLLRLQDHHDKILKKFLPKIYK
HLDREGVNTSLYTLKWFMQCFLDRLPFSLVLRLYDVFILEGDRILTAMAY
HILKMFRKQILKMDLEGIAPLLQEDVPGYNFDNDEIMESLQETIAELKRG
KLDKAPPPTEAEQPSKPLGTLPQRNSYITASKRARSIGDRKSTIEVPMGR
PPSPTPSDKNHANGNTSPEQIEYKGLVIKQPKTHVITQPAPNHYDRKGSS
PQPLPSYSEFIEKKNQLQNQISGHSDTSSFGQRSPPLRSVPPPASSPFSP
PAGSPSRNSPILVRSSMKVDKKSKKGKKENDSKFYVEDTVDFHSSYSISS
SNFSEQMYRGPSPTSPTIWSAEVQSSRGYTTSVSSSEDQRSPRPNGYSGP
KMPPRDYDDDDEELHHSNSRKIKNRKGTTHRVLNSDGLRPNEAANETRL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_004285XLOC_004285Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00007595TCONS_00007595Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000195Rab-GTPase-TBC_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000195Rab-GTPase-TBC domainSMARTSM00164tbc_4coord: 98..314
e-value: 1.9E-64
score: 230.1
IPR000195Rab-GTPase-TBC domainPFAMPF00566RabGAP-TBCcoord: 104..311
e-value: 2.2E-56
score: 190.8
IPR000195Rab-GTPase-TBC domainPROSITEPS50086TBC_RABGAPcoord: 101..291
score: 36.253
IPR000195Rab-GTPase-TBC domainSUPERFAMILY47923Ypt/Rab-GAP domain of gyp1pcoord: 87..251
IPR000195Rab-GTPase-TBC domainSUPERFAMILY47923Ypt/Rab-GAP domain of gyp1pcoord: 226..328
NoneNo IPR availableGENE3D1.10.10.750coord: 68..116
e-value: 8.6E-15
score: 53.9
NoneNo IPR availableGENE3D1.10.8.270coord: 120..213
e-value: 4.1E-27
score: 93.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 436..649
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 350..418

Blast
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BLAST of TCONS_00007595-protein vs. Swiss-Prot (Human)
Match: US6NL (USP6 N-terminal-like protein OS=Homo sapiens GN=USP6NL PE=1 SV=3)

HSP 1 Score: 442.965 bits (1138), Expect = 1.749e-145
Identity = 209/364 (57.42%), Postives = 270/364 (74.18%), Query Frame = 0 
Query:   14 RAAIVARYERGPEGP-IEPWEDASFIVYQVCDRYGFLHKNPLPQYE-KDEKVMELERERAKKWLKMIAGWETYFIDNKVSEKLRRRVYKGIPDSIRGSAWKMMLNIDHVAKAG--VYTRFKNIALENSPDIRQIDLDVNRTYRDHIMFRDRFSIKQQALFNVLAAYSLYNTDVGYCQGMSGITALLLMYMNEEDAFWALSELLNDKKHAMHGLFIPGFPKLLRLQDHHDKILKKFLPKIYKHLDREGVNTSLYTLKWFMQCFLDRLPFSLVLRLYDVFILEGDRILTAMAYHILKMFRKQILKMDLEGIAPLLQEDVP-GYNFDNDEIMESLQETIAELKRGKLDKAPPPTEAEQPSKPLGTLP 372
            RA IVA+Y+RG EG  IEPWEDA ++VY+V DR+GFLH+  LP +    E+   LE ER  KWLKM+ GWE Y    K +EK  RR+YKGIP  +RG  W ++L I  + +    +Y++ K+ A   SPDIRQIDLDVNRT+RDHIMFRDR+ +KQQ+LF+VLAAYS+YNT+VGYCQGMS ITALLLMYMNEEDAFWAL +L +  KHAMHG F+ GFPKLLR Q+HH+KIL KFL K+ +HLD + + TS YT+KWF QCFLDR PF+L LR++D++I EG+R+LTAM+Y ILK+ +K ++K+ +E +    QE +   + F++D ++E LQ ++ ELKR KLD   P  E E P KPLG LP
Sbjct:   15 RAEIVAKYDRGREGAEIEPWEDADYLVYKVTDRFGFLHEEELPDHNVAVERQKHLEIERTTKWLKMLKGWEKY----KNTEKFHRRIYKGIPLQLRGEVWALLLEIPKMKEETRDLYSKLKHRARGCSPDIRQIDLDVNRTFRDHIMFRDRYGVKQQSLFHVLAAYSIYNTEVGYCQGMSQITALLLMYMNEEDAFWALVKLFSGPKHAMHGFFVQGFPKLLRFQEHHEKILNKFLSKLKQHLDSQEIYTSFYTMKWFFQCFLDRTPFTLNLRIWDIYIFEGERVLTAMSYTILKLHKKHLMKLSMEELVEFFQETLAKDFFFEDDFVIEQLQISMTELKRAKLDLPEPGKEDEYPKKPLGQLP 374
The following BLAST results are available for this feature:
BLAST of TCONS_00007595-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
US6NL1.749e-14557.42USP6 N-terminal-like protein OS=Homo sapiens GN=US... [more]
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