TCONS_00007520-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00007520-protein
Unique NameTCONS_00007520-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length311

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00007520-protein ID=TCONS_00007520-protein|Name=TCONS_00007520-protein|organism=Clytia hemisphaerica|type=polypeptide|length=311bp
MTSPSSNVDDSDFLSRYPLINHKRKFKEQIKLNIRDKFSITEREGHRAKC
GQKQNTTDFLRDNNNNRISTPERKYNEVPSNIYDQHNKNMPLLEQQRRRL
SDDESNSDNETTNSPGAKKSFDLEESGQFPSYTAMIAQAVLSTPQHKITL
GGIYDFIEMNYKGLEKRVKGWRNCVRHNLSLNECFIKLGRSENGRGNDWT
IHPNYLNSFMKGEYRKRRACMKKRFDFVWLSNIAQTSPPRHQCTCSPCNT
RTPYPVPAFPHRHSPPHTSSRVDTELDYGSEVYLRTNKRSHSTEYRHHPY
KPLTPPFTPKF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_004250XLOC_004250Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00007520TCONS_00007520Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001766Fork_head_dom
IPR011991WHTH_DNA-bd_dom
Vocabulary: Molecular Function
TermDefinition
GO:0003700transcription factor activity, sequence-specific DNA binding
GO:0043565sequence-specific DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
molecular_function GO:0043565 sequence-specific DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 83..103
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 42..123
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 289..311
IPR001766Fork head domainPRINTSPR00053FORKHEADcoord: 171..188
score: 63.23
coord: 148..165
score: 30.64
coord: 127..140
score: 32.82
IPR001766Fork head domainSMARTSM00339forkneu4coord: 131..213
e-value: 2.2E-20
score: 83.7
IPR001766Fork head domainPFAMPF00250Forkheadcoord: 131..209
e-value: 1.3E-24
score: 86.1
IPR001766Fork head domainPROSITEPS50039FORK_HEAD_3coord: 131..219
score: 23.268
IPR011991Winged helix-turn-helix DNA-binding domainGENE3D1.10.10.10coord: 101..212
e-value: 3.3E-24
score: 84.4
IPR011991Winged helix-turn-helix DNA-binding domainSUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 131..218

Blast
[Close]
BLAST of TCONS_00007520-protein vs. Swiss-Prot (Human)
Match: FOXL1 (Forkhead box protein L1 OS=Homo sapiens GN=FOXL1 PE=2 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 5.494e-20
Identity = 39/90 (43.33%), Postives = 58/90 (64.44%), Query Frame = 0 
Query:  131 SYTAMIAQAVLSTPQHKITLGGIYDFIEMNYKGLEKRVKGWRNCVRHNLSLNECFIKLGRSEN--GRGNDWTIHPNYLNSFMKGEYRKRR 218
            SY A+IA A+   P+ ++TL GIY FI   +       +GW+N +RHNLSLN+CF+K+ R +   G+G+ WT+ P  L+ F  G YR+R+
Sbjct:   53 SYIALIAMAIQDAPEQRVTLNGIYQFIMDRFPFYHDNRQGWQNSIRHNLSLNDCFVKVPREKGRPGKGSYWTLDPRCLDMFENGNYRRRK 142
The following BLAST results are available for this feature:
BLAST of TCONS_00007520-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FOXL15.494e-2043.33Forkhead box protein L1 OS=Homo sapiens GN=FOXL1 P... [more]
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