TCONS_00007420-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00007420-protein
Unique NameTCONS_00007420-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length313

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00007420-protein ID=TCONS_00007420-protein|Name=TCONS_00007420-protein|organism=Clytia hemisphaerica|type=polypeptide|length=313bp
WDYQPNGIDCKLWTKIAVNQIPVDPPIQVLEVERFPEKRCFSACHYNKKC
VLLLIEKFNQNDFQCRFYDKAHLVLKPHKGESTLFTTRLLKESCNDWSDS
GFNQTGVYPIYLPNGMLKNVRCNMDVLGGGWLVFQRRFNGVENFLRNWDE
YKNGFGSVSSEHWLGNEILHLLTSNGRYEFYLHGSRFNNETQHTRWDYFE
VESEENQYKLKSGAIKISGHDAMAIHWGSKFTSHDRDNDLREGRNCAAMR
SRGAFWYTGNTGTAGSGCGELYLNGKYFFEESGSTNKTGIIWRNWIDDYK
SLKMTEFMIRKID
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_004178XLOC_004178Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00007420TCONS_00007420Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002181Fibrinogen_a/b/g_C_dom
IPR014716Fibrinogen_a/b/g_C_1
IPR014715Fibrinogen_a/b/g_C_2
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainSMARTSM00186FBG_2coord: 89..312
e-value: 1.3E-40
score: 150.9
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainPFAMPF00147Fibrinogen_Ccoord: 92..310
e-value: 4.7E-45
score: 154.0
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainPROSITEPS51406FIBRINOGEN_C_2coord: 85..313
score: 40.624
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainCDDcd00087FReDcoord: 93..310
e-value: 4.14736E-65
score: 205.167
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainSUPERFAMILY56496Fibrinogen C-terminal domain-likecoord: 86..312
IPR014716Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1GENE3D3.90.215.10coord: 52..230
e-value: 1.9E-48
score: 164.5
IPR014715Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 2GENE3D4.10.530.10coord: 231..303
e-value: 2.1E-16
score: 59.2

Blast
[Close]
BLAST of TCONS_00007420-protein vs. Swiss-Prot (Human)
Match: TENR (Tenascin-R OS=Homo sapiens GN=TNR PE=1 SV=3)

HSP 1 Score: 148.673 bits (374), Expect = 7.364e-40
Identity = 92/236 (38.98%), Postives = 123/236 (52.12%), Query Frame = 0 
Query:   82 STLFTT--RLLK--ESCNDWSDSGFNQTGVYPIYLPNGMLKN---VRCNMDVLGGGWLVFQRRFNGVENFLRNWDEYKNGFGSVSSEHWLGNEILHLLTSNGRYEFYLHGSRFNNETQHTRWDYFEVESEENQYKLKSGAIKISGHDAMAIHWGSKFTSHDRDNDLREGRNCAAMRSRGAFWYTGNTGTAGSGCGELYLNGKYFFEESGSTNKTGIIWRNWIDDYKSLKMTEFMIR 310
            ST FTT  R+    + C     +G   +GVYPI+L NG L     V C+M   GGGW+VFQRR NG  +F R W +Y+ GFG+V  E WLG + +H +TS GRYE  +   R   E     +D F VE   N YKL+ G+   +  D+++ H G  F++ DRDND+    NC AM  +GA+WY          C    LNGKY      S +  GI W +W     S+   E  +R
Sbjct: 1122 STAFTTGGRVFPHPQDCAQHLMNGDTLSGVYPIFL-NGELSQKLQVYCDMTTDGGGWIVFQRRQNGQTDFFRKWADYRVGFGNVEDEFWLGLDNIHRITSQGRYELRVD-MRDGQEAAFASYDRFSVEDSRNLYKLRIGSYNGTAGDSLSYHQGRPFSTEDRDNDVAV-TNC-AMSYKGAWWY--------KNCHRTNLNGKY----GESRHSQGINWYHWKGHEFSIPFVEMKMR 1341
The following BLAST results are available for this feature:
BLAST of TCONS_00007420-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TENR7.364e-4038.98Tenascin-R OS=Homo sapiens GN=TNR PE=1 SV=3[more]
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