TCONS_00007316-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00007316-protein
Unique NameTCONS_00007316-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length270

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00007316-protein ID=TCONS_00007316-protein|Name=TCONS_00007316-protein|organism=Clytia hemisphaerica|type=polypeptide|length=270bp
MNARILIVLSLVALAAGCGKQYFPASRVIGGTNAKPNSWPWQIVLLSNGR
PGCGGSIISPNWIVTAGHCVVDRSDRKKPASSLSVKVGKHDLRRRERYER
EYRASQVIVHPGFSMRHMKNDVALIRLSSPIQFNQAVQPICLPKSAARVG
QTCYITGWGRASRSARQMHHTLQQASMPVVDQRTCAYHMQRVAPLPIGPH
SICSGYGRTRISGCQGDSGGPFVCNNGRNWELHGAVSWGSRDCSARPNQY
SVYANIYYLKSWISRTTGVY
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_004103XLOC_004103Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00007316TCONS_00007316Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001314Peptidase_S1A
IPR001254Trypsin_dom
IPR018114TRYPSIN_HIS
IPR033116TRYPSIN_SER
IPR009003Peptidase_S1_PA
Vocabulary: Molecular Function
TermDefinition
GO:0004252serine-type endopeptidase activity
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
molecular_function GO:0004252 serine-type endopeptidase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001314Peptidase S1A, chymotrypsin familyPRINTSPR00722CHYMOTRYPSINcoord: 211..223
score: 60.34
coord: 54..69
score: 51.74
coord: 117..131
score: 36.24
IPR001254Serine proteases, trypsin domainSMARTSM00020trypsin_2coord: 27..263
e-value: 1.1E-81
score: 287.3
IPR001254Serine proteases, trypsin domainPFAMPF00089Trypsincoord: 28..263
e-value: 2.9E-65
score: 220.1
IPR001254Serine proteases, trypsin domainPROSITEPS50240TRYPSIN_DOMcoord: 28..268
score: 34.354
IPR001254Serine proteases, trypsin domainCDDcd00190Tryp_SPccoord: 28..266
e-value: 2.13714E-79
score: 241.026
NoneNo IPR availableGENE3D2.40.10.10coord: 27..38
e-value: 1.4E-5
score: 24.2
NoneNo IPR availableGENE3D2.40.10.10coord: 138..269
e-value: 6.0E-38
score: 129.6
NoneNo IPR availableGENE3D2.40.10.10coord: 59..137
e-value: 2.8E-31
score: 107.0
NoneNo IPR availableGENE3D2.40.10.10coord: 39..58
e-value: 2.2E-17
score: 62.4
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..18
score: 5.0
IPR018114Serine proteases, trypsin family, histidine active sitePROSITEPS00134TRYPSIN_HIScoord: 64..69
IPR033116Serine proteases, trypsin family, serine active sitePROSITEPS00135TRYPSIN_SERcoord: 212..223
IPR009003Peptidase S1, PA clanSUPERFAMILY50494Trypsin-like serine proteasescoord: 12..268

Blast
[Close]
BLAST of TCONS_00007316-protein vs. Swiss-Prot (Human)
Match: CTRB1 (Chymotrypsinogen B OS=Homo sapiens GN=CTRB1 PE=2 SV=2)

HSP 1 Score: 162.54 bits (410), Expect = 5.721e-49
Identity = 99/272 (36.40%), Postives = 138/272 (50.74%), Query Frame = 0 
Query:    5 ILIVLSLVALAAGCGKQYFPA--------SRVIGGTNAKPNSWPWQIVLLS-NGRPGCGGSIISPNWIVTAGHCVVDRSDRKKPASSLSVKVGKHDLRRRERYEREYRASQVIVHPGFSMRHMKNDVALIRLSSPIQFNQAVQPICLPKSAARV--GQTCYITGWGRASRSARQMHHTLQQASMPVVDQRTCAYHMQRVAPLPIGPHSICSGYGRTRISGCQGDSGGPFVCNNGRNWELHGAVSWGSRDCSARPNQYSVYANIYYLKSWISR 265
            +L   SLV  A GCG    PA        SR++ G +A P SWPWQ+ L    G   CGGS+IS +W+VTA HC V  SD         V  G+ D    E   +  + ++V  +P FS+  + ND+ L++L++P +F+Q V  +CLP +      G  C  TGWG+   +A +    LQQA++P++    C     R     I    IC+G   + +S C GDSGGP VC     W L G VSWGS  CS   +   VYA +  L  W+ +
Sbjct:    6 LLSCFSLVGAAFGCG---VPAIHPVLSGLSRIVNGEDAVPGSWPWQVSLQDKTGFHFCGGSLISEDWVVTAAHCGVRTSDV--------VVAGEFDQGSDEENIQVLKIAKVFKNPKFSILTVNNDITLLKLATPARFSQTVSAVCLPSADDDFPAGTLCATTGWGKTKYNANKTPDKLQQAALPLLSNAECKKSWGR----RITDVMICAG--ASGVSSCMGDSGGPLVCQKDGAWTLVGIVSWGSDTCST--SSPGVYARVTKLIPWVQK 258
The following BLAST results are available for this feature:
BLAST of TCONS_00007316-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CTRB15.721e-4936.40Chymotrypsinogen B OS=Homo sapiens GN=CTRB1 PE=2 S... [more]
back to top