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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00007019-protein ID=TCONS_00007019-protein|Name=TCONS_00007019-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1473bp
DCPAGHFCPVGTVTPQPCPSGYYSNVTNVPRSVECFPCPAGKYCAGTGNL
EPTEDCDAGFYCKQAAYTSAPPGGLTGGLCPAGGYCGRGAKKVEVCPSGY
YNPNEGAKSPSDCIECPSGFYCAGSMKAEPTGPCNEGYFCNGTAKRPDQY
PALAGSYAPKQSPAAIPCPLGTFQTQAQFGKCDDCTEGAYCDESGLSKAK
NCPLGAYCPVKTIIPIDCPEGTFNPEPSGKTLGDCQNCTAGEYCKGVGLN
ATSGKCFAGFYCLLGSPMPNPPDGSVFGGECQEGYYCPEGSVKATTAACL
KATYNPIKGGTNSSACLPCPGGKACTGKGLAEPDAVCSPGYYCISGAERV
DPVDGGTGDRCPIGNYCPGNTSTYIPCEPGTYSNVTTLSKCDECPERYYC
NNRITPVRCPPGYYCPAGSGYEHIKPCPLGTWDENGGLAEESECTECPPT
KYCGKLATTDFTSSNSSGLCAAGFYCKSGITTRTPYPPLTRGVGGVCPQG
HYCPEGTDDPDKCPAGKYSSQTGLEREDQCTLCEFGEYCETAGLNATSGK
CDPGFYCYRGANSPNNPTDDGTSGPCPIGHYCPLGTSHPRGCPAGTYMPV
TGQSECFPCMEGYYCPANSTDYKPYPCPAGHFCPNGTRFDTQNPCPSGTF
RNQTHGQEQSDCFPCLPGQYCANTGMEKPSGPCAPGFYCVRGSKSRMPLE
YDNFTSGDCLCPTNTTGGECQPGFYCPEGSYEPTPCDGGYYCAGKRNHNS
STPCQPGFYCSGGSAVPNPRDGIHGNVCPEGKYCEEKTEIPTDCPAGRYS
NATGNMELNDCSLCEPGKYCQGLGNTKPTAPCDQGFYCPAGQSQKDPPAY
VCQPGHKCPTGSPAQELCESGTWTDLTKQWECKICIEGYYCDRKDAQVTP
ISDYTRYPCPNGFYCLNGTRFSTEYGCPNGTYGNGTKLTRPDQCLPCPAG
KYCLGASPTYTDDCDAGHHCIGGSFVPNPVDGVRGVACPEGKYCLKGTAT
PSNCPTGTFNNNTGLKAESECTPCSPGMYCLANGLTYPTEKCDERYFCEA
GARYPKPQDTSTAGNCTAGHYCPRGTYKPIPCEDGTYMPSILAKECFECP
VGSYCVGDHLAPNPCPAGFYCPAGTGFDWKSCPPGTFNAEVGLHNSSSCQ
PCLGGMYCPHYNATYPEGFCAPGYFCEEGSDTDKPESNHLGIAGPCTPGN
YCPINTTHPLPCPKGRYSNQTHLKESNDCSPCDPGMYCGTQGLQEPTGPC
DAGFYCLDGSEVRNPPTVTSSGGPCWVGHYCTNGTSYPITCAPGTFNDRT
GQSECDKCCEGYYCPKNTTTCVNECPMGFYCPKGTSQPDAFPXCVNECPM
GFYCPKGTSQPDAFPCPAGTYNNKTRRTSPEDCTPCDPGMYCPSAGLTDP
FDECDAGWYCRRGAWSNRPIDIGNFTDGCYCSNVSTGGQCQPGFYCPKKS
NEPLPCPAGRFCLTIGLPAPSGL Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005576 | extracellular region |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006030 | chitin metabolic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008061 | chitin binding |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0006030 |
chitin metabolic process |
| cellular_component |
GO:0005576 |
extracellular region |
| molecular_function |
GO:0008061 |
chitin binding |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR011641 | Tyrosine-protein kinase ephrin type A/B receptor-like | SMART | SM01411 | GCC2_GCC3_2 | coord: 1118..1170
e-value: 3.4
score: 12.2
coord: 1278..1325
e-value: 5.0E-7
score: 39.3
coord: 284..337
e-value: 0.11
score: 21.6
coord: 500..551
e-value: 0.002
score: 27.4
coord: 1069..1115
e-value: 1.3E-7
score: 41.2
coord: 991..1042
e-value: 2.3E-4
score: 30.5
coord: 155..202
e-value: 0.0034
score: 26.6
coord: 412..470
e-value: 18.0
score: 5.6
coord: 797..852
e-value: 17.0
score: 5.9
coord: 579..627
e-value: 9.1E-4
score: 28.5
coord: 855..909
e-value: 0.04
score: 23.1
coord: 912..964
e-value: 2.4
score: 13.5
coord: 5..56
e-value: 3.0E-9
score: 46.7
coord: 1199..1250
e-value: 3.8
score: 11.7
coord: 1351..1404
e-value: 3.9E-5
score: 33.0
coord: 84..134
e-value: 0.0068
score: 25.6
coord: 630..683
e-value: 1.2
score: 16.4
coord: 723..794
e-value: 0.0085
score: 25.3
coord: 205..256
e-value: 0.61
score: 18.9
coord: 364..409
e-value: 0.0016
score: 27.7 |
| None | No IPR available | GENE3D | 2.10.50.10 | | coord: 1056..1080
e-value: 0.12
score: 11.9
coord: 631..650
e-value: 0.037
score: 13.5 |
| None | No IPR available | GENE3D | 2.10.50.10 | | coord: 1429..1472
e-value: 0.0013
score: 18.5
coord: 852..915
e-value: 4.1E-12
score: 45.8
coord: 988..1055
e-value: 1.4E-13
score: 50.5
coord: 209..271
e-value: 2.8E-11
score: 43.1
coord: 576..630
e-value: 1.0E-16
score: 60.5
coord: 2..71
e-value: 1.0E-14
score: 54.1
coord: 153..208
e-value: 2.8E-11
score: 43.1
coord: 1275..1340
e-value: 6.8E-14
score: 51.5
coord: 1081..1120
e-value: 7.7E-15
score: 54.5
coord: 281..352
e-value: 7.5E-10
score: 38.5
coord: 651..698
e-value: 3.3E-10
score: 39.7
coord: 80..149
e-value: 3.5E-11
score: 42.8
coord: 1196..1265
e-value: 1.8E-14
score: 53.3
coord: 361..415
e-value: 4.6E-14
score: 52.0
coord: 778..847
e-value: 9.2E-15
score: 54.3 |
| None | No IPR available | GENE3D | 2.10.50.10 | | coord: 1345..1428
e-value: 5.7E-15
score: 55.0
coord: 494..574
e-value: 6.3E-14
score: 51.6
coord: 736..772
e-value: 0.01
score: 15.7
coord: 416..491
e-value: 6.8E-11
score: 41.9
coord: 706..735
e-value: 0.13
score: 12.2
coord: 916..984
e-value: 1.4E-11
score: 44.2
coord: 1121..1190
e-value: 1.3E-14
score: 53.8 |
| IPR002557 | Chitin binding domain | PROSITE | PS50940 | CHIT_BIND_II | coord: 1045..1096
score: 6.759 |
| IPR002557 | Chitin binding domain | PROSITE | PS50940 | CHIT_BIND_II | coord: 967..1032
score: 6.378 |
| IPR002557 | Chitin binding domain | PROSITE | PS50940 | CHIT_BIND_II | coord: 1173..1240
score: 6.239 |
| IPR002557 | Chitin binding domain | PROSITE | PS50940 | CHIT_BIND_II | coord: 1253..1306
score: 7.0 |
| IPR002557 | Chitin binding domain | PROSITE | PS50940 | CHIT_BIND_II | coord: 340..402
score: 6.289 |
| IPR002557 | Chitin binding domain | PROSITE | PS50940 | CHIT_BIND_II | coord: 188..246
score: 6.01 |
| IPR002557 | Chitin binding domain | PROSITE | PS50940 | CHIT_BIND_II | coord: 1..35
score: 7.013 |
| IPR002557 | Chitin binding domain | PROSITE | PS50940 | CHIT_BIND_II | coord: 757..822
score: 6.581 |
| IPR002557 | Chitin binding domain | PROSITE | PS50940 | CHIT_BIND_II | coord: 612..673
score: 7.038 |
| IPR002557 | Chitin binding domain | PROSITE | PS50940 | CHIT_BIND_II | coord: 1328..1394
score: 6.404 |
| IPR002557 | Chitin binding domain | PROSITE | PS50940 | CHIT_BIND_II | coord: 473..541
score: 5.871 |
| IPR002557 | Chitin binding domain | PROSITE | PS50940 | CHIT_BIND_II | coord: 554..606
score: 5.896 |
| IPR002557 | Chitin binding domain | PROSITE | PS50940 | CHIT_BIND_II | coord: 835..893
score: 7.406 |
| IPR009030 | Growth factor receptor cysteine-rich domain | SUPERFAMILY | 57184 | Growth factor receptor domain | coord: 217..244
coord: 278..331
coord: 360..416 |
| IPR009030 | Growth factor receptor cysteine-rich domain | SUPERFAMILY | 57184 | Growth factor receptor domain | coord: 78..143
coord: 2..43 |
| IPR009030 | Growth factor receptor cysteine-rich domain | SUPERFAMILY | 57184 | Growth factor receptor domain | coord: 927..1050 |
| IPR009030 | Growth factor receptor cysteine-rich domain | SUPERFAMILY | 57184 | Growth factor receptor domain | coord: 772..894 |
Blast
The following BLAST results are available for this feature:
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