TCONS_00006884-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00006884-protein
Unique NameTCONS_00006884-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length677

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00006884-protein ID=TCONS_00006884-protein|Name=TCONS_00006884-protein|organism=Clytia hemisphaerica|type=polypeptide|length=677bp
MDEMELDVDQIGDFENERARNIMQNYEFMKACGLPVKNPALNKKKVEKIE
VEDRFAYLSDEDHSDDNKDDEDWSPSKDISTWSGETKKSSEPAKQKRVKT
IKKVGPTSTTKKIPPNKTQPVRNRERNEIVENKPIPEDPKPSSTSRYPKR
GGTRKCYKEQQVPDEDHFLYCEQCEDFYFGDCPVHGPLFPLADKDCPDTE
NRSLASLPDGLEVRESNIPGAGLGVFAKREFNSGTRFGPYEGKKVRPDIP
KDDMDTSYMWEIMKEGRVVYYVNGKDEKYGNWLRYINCSRTEAEQNLVAF
QYHGQIYYRAYKEMKVGDELLVWYGDEYARDLGIVAADMKDERGDASPLK
QKDPSTKKDIGPIFTCRYCSISYSHDKYLQKHLKFCRKIPIDVEVLAKVN
ANRSQMTEMNARKVEMKRKQKDEDRSKEKPYKCDNCEKRFNQSGALQRHL
RTHTGDKPYRCDICGKGFNQSGALQRHLRTHTGDKPYRCDICGRGFSNSS
HLQTHLRTHTGEKPYKCDICGERFAHSNSLKNHLHFHTGDGRPHKCDICG
KGFNQSGALQRHLRTHTGDKPYRCDICGRGFSNSSHLQTHLRTHTGEKPY
KCDICGRGFSNSSHLQTHLRTHTGEKPYKCDICGKGFNQTGNLQTHLRTH
TGEKPYKCDVCGKFFSVSSSLKKHKCR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_003858XLOC_003858Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00006884TCONS_00006884Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR001214SET_dom
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 656..676
e-value: 36.0
score: 8.4
coord: 515..537
e-value: 0.0077
score: 25.4
coord: 628..650
e-value: 6.6E-5
score: 32.3
coord: 487..509
e-value: 4.6E-5
score: 32.8
coord: 431..453
e-value: 7.7E-5
score: 32.1
coord: 600..622
e-value: 4.0E-5
score: 33.0
coord: 364..384
e-value: 47.0
score: 7.3
coord: 544..566
e-value: 3.1E-5
score: 33.4
coord: 572..594
e-value: 4.6E-5
score: 32.8
coord: 459..481
e-value: 1.3E-5
score: 34.6
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 461..481
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 630..650
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 489..509
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 546..566
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 517..537
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 574..594
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 433..453
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 602..622
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 459..486
score: 17.205
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 600..627
score: 17.932
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 544..571
score: 16.519
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 487..514
score: 17.828
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 628..655
score: 17.641
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 515..542
score: 13.277
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 572..599
score: 17.828
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 431..458
score: 16.623
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 656..677
score: 10.429
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 581..637
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 429..481
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 468..524
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 542..594
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 622..674
IPR001214SET domainSMARTSM00317set_7coord: 209..331
e-value: 3.4E-14
score: 63.2
IPR001214SET domainPFAMPF00856SETcoord: 222..325
e-value: 1.9E-7
score: 31.6
IPR001214SET domainPROSITEPS50280SETcoord: 209..325
score: 15.416
NoneNo IPR availableGENE3D3.30.160.60coord: 356..437
e-value: 9.6E-8
score: 31.5
NoneNo IPR availableGENE3D3.30.160.60coord: 461..476
e-value: 3.3E-18
score: 64.9
NoneNo IPR availableGENE3D2.30.30.380coord: 556..577
e-value: 2.1E-13
score: 49.7
NoneNo IPR availableGENE3D3.30.160.60coord: 650..676
e-value: 1.3E-13
score: 50.3
NoneNo IPR availableGENE3D3.30.160.60coord: 501..527
e-value: 1.1E-21
score: 76.4
NoneNo IPR availablePIRSFPIRSF013212PRDM1_SETcoord: 398..528
e-value: 1.1E-35
score: 121.5
coord: 517..616
e-value: 1.5E-30
score: 104.4
coord: 600..676
e-value: 7.4E-27
score: 92.3
coord: 190..430
e-value: 1.2E-30
score: 104.7
NoneNo IPR availablePFAMPF00096zf-C2H2coord: 544..566
e-value: 8.5E-6
score: 25.9
coord: 515..537
e-value: 0.011
score: 16.1
coord: 487..509
e-value: 1.6E-6
score: 28.1
coord: 431..453
e-value: 1.8E-5
score: 24.8
coord: 459..481
e-value: 2.6E-6
score: 27.5
coord: 628..650
e-value: 3.5E-6
score: 27.1
coord: 656..676
e-value: 0.0037
score: 17.5
coord: 572..594
e-value: 1.6E-6
score: 28.1
coord: 600..622
e-value: 1.3E-6
score: 28.4
NoneNo IPR availableGENE3D3.30.160.60coord: 613..634
e-value: 3.3E-22
score: 78.1
NoneNo IPR availableGENE3D3.30.160.60coord: 635..649
e-value: 2.9E-17
score: 61.8
coord: 578..593
e-value: 1.8E-16
score: 59.3
NoneNo IPR availableGENE3D2.170.270.10coord: 167..334
e-value: 2.3E-28
score: 98.6
NoneNo IPR availableGENE3D2.20.28.30coord: 528..555
e-value: 5.9E-18
score: 64.4
NoneNo IPR availableGENE3D3.30.160.60coord: 594..612
e-value: 4.6E-20
score: 71.0
NoneNo IPR availableGENE3D2.40.155.10coord: 438..460
e-value: 1.8E-21
score: 76.7
NoneNo IPR availableGENE3D3.30.160.60coord: 477..500
e-value: 1.2E-24
score: 85.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 55..158
NoneNo IPR availableSUPERFAMILY82199SET domaincoord: 156..328

Blast
BLAST of TCONS_00006884-protein vs. Swiss-Prot (Human)
Match: ZN235 (Zinc finger protein 235 OS=Homo sapiens GN=ZNF235 PE=2 SV=3)

HSP 1 Score: 309.301 bits (791), Expect = 5.074e-95
Identity = 144/248 (58.06%), Postives = 184/248 (74.19%), Query Frame = 0
Query:  428 EKPYKCDNCEKRFNQSGALQRHLRTHTGDKPYRCDICGKGFNQSGALQRHLRTHTGDKPYRCDICGRGFSNSSHLQTHLRTHTGEKPYKCDICGERFAHSNSLKNHLHFHTGDGRPHKCDICGKGFNQSGALQRHLRTHTGDKPYRCDICGRGFSNSSHLQTHLRTHTGEKPYKCDICGRGFSNSSHLQTHLRTHTGEKPYKCDICGKGFNQTGNLQTHLRTHTGEKPYKCDVCGKFFSVSSSLKKHK 675
            EKPY+CD+C K F++S  L  H R HTG+KPY+C++CGKGF Q   LQ H R HTG+KPY+C  CG+ FS SS+L TH R HT EKPYKCD CG+ F+ S +L +H   HTG+ +P+KC+ CGKGF+ + + Q H R HTG+KP+RC++CG+GFS SS+ Q H R HTGEKPYKC++CG+ F+ S +L  H R HTGEKPYKC+ CGKGF+Q  NLQ H   HTGEKP+KCD C K FS +S L+ H+
Sbjct:  372 EKPYRCDSCGKGFSRSTDLNIHCRVHTGEKPYKCEVCGKGFTQRSHLQAHERIHTGEKPYKCGDCGKRFSCSSNLHTHQRVHTEEKPYKCDECGKCFSLSFNLHSHQRVHTGE-KPYKCEECGKGFSSASSFQSHQRVHTGEKPFRCNVCGKGFSQSSYFQAHQRVHTGEKPYKCEVCGKRFNWSLNLHNHQRVHTGEKPYKCEECGKGFSQASNLQAHQSVHTGEKPFKCDACQKRFSQASHLQAHQ 618          

HSP 2 Score: 308.916 bits (790), Expect = 8.040e-95
Identity = 142/250 (56.80%), Postives = 180/250 (72.00%), Query Frame = 0
Query:  426 SKEKPYKCDNCEKRFNQSGALQRHLRTHTGDKPYRCDICGKGFNQSGALQRHLRTHTGDKPYRCDICGRGFSNSSHLQTHLRTHTGEKPYKCDICGERFAHSNSLKNHLHFHTGDGRPHKCDICGKGFNQSGALQRHLRTHTGDKPYRCDICGRGFSNSSHLQTHLRTHTGEKPYKCDICGRGFSNSSHLQTHLRTHTGEKPYKCDICGKGFNQTGNLQTHLRTHTGEKPYKCDVCGKFFSVSSSLKKHK 675
            ++EKPYKCD C K F+ S  L  H R HTG+KPY+C+ CGKGF+ + + Q H R HTG+KP+RC++CG+GFS SS+ Q H R HTGEKPYKC++CG+RF  S +L NH   HTG+ +P+KC+ CGKGF+Q+  LQ H   HTG+KP++CD C + FS +SHLQ H R HTGEKPYKCD CG+ FS  S+LQ H   HTGEKP+KC+ CGK F+ +  L  H R HTGEKPY C  CGK FS +S    H+
Sbjct:  454 TEEKPYKCDECGKCFSLSFNLHSHQRVHTGEKPYKCEECGKGFSSASSFQSHQRVHTGEKPFRCNVCGKGFSQSSYFQAHQRVHTGEKPYKCEVCGKRFNWSLNLHNHQRVHTGE-KPYKCEECGKGFSQASNLQAHQSVHTGEKPFKCDACQKRFSQASHLQAHQRVHTGEKPYKCDTCGKAFSQRSNLQVHQIIHTGEKPFKCEECGKEFSWSAGLSAHQRVHTGEKPYTCQQCGKGFSQASHFHTHQ 702          

HSP 3 Score: 303.908 bits (777), Expect = 4.838e-93
Identity = 152/330 (46.06%), Postives = 205/330 (62.12%), Query Frame = 0
Query:  364 FTCRYCSISYSHDKYLQKHL----------------KFCRKIPIDVEVLAKVNANRSQMTEMNARKVEMKRKQKDEDR--SKEKPYKCDNCEKRFNQSGALQRHLRTHTGDKPYRCDICGKGFNQSGALQRHLRTHTGDKPYRCDICGRGFSNSSHLQTHLRTHTGEKPYKCDICGERFAHSNSLKNHLHFHTGDGRPHKCDICGKGFNQSGALQRHLRTHTGDKPYRCDICGRGFSNSSHLQTHLRTHTGEKPYKCDICGRGFSNSSHLQTHLRTHTGEKPYKCDICGKGFNQTGNLQTHLRTHTGEKPYKCDVCGKFFSVSSSLKKHK 675
            +TC  C  S++   +L  HL                 F R   +++         +    E+  +    +   +  +R  + EKPYKC +C KRF+ S  L  H R HT +KPY+CD CGK F+ S  L  H R HTG+KPY+C+ CG+GFS++S  Q+H R HTGEKP++C++CG+ F+ S+  + H   HTG+ +P+KC++CGK FN S  L  H R HTG+KPY+C+ CG+GFS +S+LQ H   HTGEKP+KCD C + FS +SHLQ H R HTGEKPYKCD CGK F+Q  NLQ H   HTGEKP+KC+ CGK FS S+ L  H+
Sbjct:  347 YTCHECGKSFNQSSHLYAHLPIHTGEKPYRCDSCGKGFSRSTDLNIHCRVHT-GEKPYKCEVCGKGFTQRSHLQAHERIHTGEKPYKCGDCGKRFSCSSNLHTHQRVHTEEKPYKCDECGKCFSLSFNLHSHQRVHTGEKPYKCEECGKGFSSASSFQSHQRVHTGEKPFRCNVCGKGFSQSSYFQAHQRVHTGE-KPYKCEVCGKRFNWSLNLHNHQRVHTGEKPYKCEECGKGFSQASNLQAHQSVHTGEKPFKCDACQKRFSQASHLQAHQRVHTGEKPYKCDTCGKAFSQRSNLQVHQIIHTGEKPFKCEECGKEFSWSAGLSAHQ 674          

HSP 4 Score: 294.664 bits (753), Expect = 1.613e-89
Identity = 137/248 (55.24%), Postives = 176/248 (70.97%), Query Frame = 0
Query:  428 EKPYKCDNCEKRFNQSGALQRHLRTHTGDKPYRCDICGKGFNQSGALQRHLRTHTGDKPYRCDICGRGFSNSSHLQTHLRTHTGEKPYKCDICGERFAHSNSLKNHLHFHTGDGRPHKCDICGKGFNQSGALQRHLRTHTGDKPYRCDICGRGFSNSSHLQTHLRTHTGEKPYKCDICGRGFSNSSHLQTHLRTHTGEKPYKCDICGKGFNQTGNLQTHLRTHTGEKPYKCDVCGKFFSVSSSLKKHK 675
            EKPYKC+ C K F+ + + Q H R HTG+KP+RC++CGKGF+QS   Q H R HTG+KPY+C++CG+ F+ S +L  H R HTGEKPYKC+ CG+ F+ +++L+ H   HTG+ +P KCD C K F+Q+  LQ H R HTG+KPY+CD CG+ FS  S+LQ H   HTGEKP+KC+ CG+ FS S+ L  H R HTGEKPY C  CGKGF+Q  +  TH R HTGE+PY CDVC K FS  S L  H+
Sbjct:  484 EKPYKCEECGKGFSSASSFQSHQRVHTGEKPFRCNVCGKGFSQSSYFQAHQRVHTGEKPYKCEVCGKRFNWSLNLHNHQRVHTGEKPYKCEECGKGFSQASNLQAHQSVHTGE-KPFKCDACQKRFSQASHLQAHQRVHTGEKPYKCDTCGKAFSQRSNLQVHQIIHTGEKPFKCEECGKEFSWSAGLSAHQRVHTGEKPYTCQQCGKGFSQASHFHTHQRVHTGERPYICDVCCKGFSQRSHLIYHQ 730          

HSP 5 Score: 270.396 bits (690), Expect = 1.829e-80
Identity = 124/225 (55.11%), Postives = 160/225 (71.11%), Query Frame = 0
Query:  428 EKPYKCDNCEKRFNQSGALQRHLRTHTGDKPYRCDICGKGFNQSGALQRHLRTHTGDKPYRCDICGRGFSNSSHLQTHLRTHTGEKPYKCDICGERFAHSNSLKNHLHFHTGDGRPHKCDICGKGFNQSGALQRHLRTHTGDKPYRCDICGRGFSNSSHLQTHLRTHTGEKPYKCDICGRGFSNSSHLQTHLRTHTGEKPYKCDICGKGFNQTGNLQTHLRTHTG 652
            EKP++C+ C K F+QS   Q H R HTG+KPY+C++CGK FN S  L  H R HTG+KPY+C+ CG+GFS +S+LQ H   HTGEKP+KCD C +RF+ ++ L+ H   HTG+ +P+KCD CGK F+Q   LQ H   HTG+KP++C+ CG+ FS S+ L  H R HTGEKPY C  CG+GFS +SH  TH R HTGE+PY CD+C KGF+Q  +L  H R HTG
Sbjct:  512 EKPFRCNVCGKGFSQSSYFQAHQRVHTGEKPYKCEVCGKRFNWSLNLHNHQRVHTGEKPYKCEECGKGFSQASNLQAHQSVHTGEKPFKCDACQKRFSQASHLQAHQRVHTGE-KPYKCDTCGKAFSQRSNLQVHQIIHTGEKPFKCEECGKEFSWSAGLSAHQRVHTGEKPYTCQQCGKGFSQASHFHTHQRVHTGERPYICDVCCKGFSQRSHLIYHQRVHTG 735          

HSP 6 Score: 227.254 bits (578), Expect = 1.149e-64
Identity = 116/223 (52.02%), Postives = 145/223 (65.02%), Query Frame = 0
Query:  453 HTGDKPYRCDICGKGFNQSGALQRHLRTHTGDKPYRCDICGRGFSNSSHLQTHLRTHTGEKPYKCDICGERFAHSNSLKNHLHFHTGDGRPHKCDICGKGFNQSGALQRHLRTHTGDKPYRCDICGRGFSNSSHLQTHLRTHTGEKPYKCDICGRGFSNSSHLQTHLRTHTGEKPYKCDICGKGFNQTGNLQTHLRTHTGEKPYKCDVCGKFFSVSSSLKKHK 675
            HTG K Y+ + C + FN S +L+ H + H G K   C    +  S SS +       TG+K Y C  CG+ F+ S++L+ H   HTG+ +P+ C  CGK FNQS  L  HL  HTG+KPYRCD CG+GFS S+ L  H R HTGEKPYKC++CG+GF+  SHLQ H R HTGEKPYKC  CGK F+ + NL TH R HT EKPYKCD CGK FS+S +L  H+
Sbjct:  257 HTGQKTYQGNECEEAFNDSSSLELHKQVHLGKKSPACSTHEKDTSYSSGIPVQQSVRTGKKRYWCHECGKGFSQSSNLQTHQRVHTGE-KPYTCHECGKSFNQSSHLYAHLPIHTGEKPYRCDSCGKGFSRSTDLNIHCRVHTGEKPYKCEVCGKGFTQRSHLQAHERIHTGEKPYKCGDCGKRFSCSSNLHTHQRVHTEEKPYKCDECGKCFSLSFNLHSHQ 478          
The following BLAST results are available for this feature:
BLAST of TCONS_00006884-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ZN2355.074e-9558.06Zinc finger protein 235 OS=Homo sapiens GN=ZNF235 ... [more]
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