TCONS_00006663-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00006663-protein
Unique NameTCONS_00006663-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length212

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00006663-protein ID=TCONS_00006663-protein|Name=TCONS_00006663-protein|organism=Clytia hemisphaerica|type=polypeptide|length=212bp
RDCKEHHLQGERINGLYRINHDTDGNDVSVYCDQTTDGGGWTVIQRRVDG
TTNFFRNWQTYKQGFGQLHYEHWLGNDNIYLLTRPRESHSEILFDLQRKD
YGRRQYAKYSLFRIDNEYNAYKLHISGFSGNIGQDKMNYHNGMKWSTRDR
DNDLRPAHDCAYDQRGAWWYNGCETSNLNGIYDSFNKEKNPDEAFGWNPF
RLEFSEMKVRRK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_003740XLOC_003740Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00006663TCONS_00006663Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002181Fibrinogen_a/b/g_C_dom
IPR014715Fibrinogen_a/b/g_C_2
IPR014716Fibrinogen_a/b/g_C_1
IPR020837Fibrinogen_CS
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainSMARTSM00186FBG_2coord: 1..212
e-value: 1.8E-69
score: 246.8
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainPFAMPF00147Fibrinogen_Ccoord: 1..208
e-value: 7.4E-58
score: 195.8
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainPROSITEPS51406FIBRINOGEN_C_2coord: 1..212
score: 47.772
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainCDDcd00087FReDcoord: 1..212
e-value: 3.70241E-77
score: 232.516
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainSUPERFAMILY56496Fibrinogen C-terminal domain-likecoord: 1..211
IPR014715Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 2GENE3D4.10.530.10coord: 145..208
e-value: 1.9E-21
score: 75.4
IPR014716Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1GENE3D3.90.215.10coord: 1..144
e-value: 3.9E-56
score: 189.6
IPR020837Fibrinogen, conserved sitePROSITEPS00514FIBRINOGEN_C_1coord: 168..180

Blast
[Close]
BLAST of TCONS_00006663-protein vs. Swiss-Prot (Human)
Match: TENR (Tenascin-R OS=Homo sapiens GN=TNR PE=1 SV=3)

HSP 1 Score: 167.548 bits (423), Expect = 8.763e-48
Identity = 85/216 (39.35%), Postives = 122/216 (56.48%), Query Frame = 0 
Query:    1 RDCKEHHLQGERINGLYRINHDTD-GNDVSVYCDQTTDGGGWTVIQRRVDGTTNFFRNWQTYKQGFGQLHYEHWLGNDNIYLLTRPRESHSEILFDLQRKDYGRRQYAKYSLFRIDNEYNAYKLHISGFSGNIGQDKMNYHNGMKWSTRDRDNDLRPAHDCAYDQRGAWWYNGCETSNLNGIYDSFNKEKNPDEAFGW-----NPFRLEFSEMKVR 210
            +DC +H + G+ ++G+Y I  + +    + VYCD TTDGGGW V QRR +G T+FFR W  Y+ GFG +  E WLG DNI+ +T   +   E+  D+  +D     +A Y  F +++  N YKL I  ++G  G D ++YH G  +ST DRDND+    +CA   +GAWWY  C  +NLNG Y     E    +   W     + F + F EMK+R
Sbjct: 1136 QDCAQHLMNGDTLSGVYPIFLNGELSQKLQVYCDMTTDGGGWIVFQRRQNGQTDFFRKWADYRVGFGNVEDEFWLGLDNIHRIT--SQGRYELRVDM--RDGQEAAFASYDRFSVEDSRNLYKLRIGSYNGTAG-DSLSYHQGRPFSTEDRDNDV-AVTNCAMSYKGAWWYKNCHRTNLNGKYG----ESRHSQGINWYHWKGHEFSIPFVEMKMR 1341
The following BLAST results are available for this feature:
BLAST of TCONS_00006663-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TENR8.763e-4839.35Tenascin-R OS=Homo sapiens GN=TNR PE=1 SV=3[more]
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