TCONS_00006539-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00006539-protein
Unique NameTCONS_00006539-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length369

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00006539-protein ID=TCONS_00006539-protein|Name=TCONS_00006539-protein|organism=Clytia hemisphaerica|type=polypeptide|length=369bp
EFHDNNSQKMVLSIILKLMQSGWKLYWVGIYALIVSLMMYATFHVMYLPP
SEHTLDVHFVYKTDCDSASTQELCSFPTGNVKLHRRPHSKEAKNAHRVLT
RGQGYDVSLELDMPLSDINQNLGMFLIQLEFLHKDNSVVDSHSRSGLLNF
QSSLLQTMSTVFYIVPLLTGWKEERQKLNIPLVENYIDDSYSPTFSINVT
LHSKRIQIYGAKLRLKALFTGLRYYMHHWPMTFSAMGFTFVLSSVFLVSL
FRFIRREFVGDDENRPRDLTSMPIPEDDYGNLSDSSGDEGVNDVINNDAI
TVEDINTQPEQQLRHRKPYNDKNERESNFNNERENNSNRERKDSGVDDDE
WTRNAINDPMDTMGRLMQF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_003697XLOC_003697Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00006539TCONS_00006539Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009617Seipin
Vocabulary: Biological Process
TermDefinition
GO:0019915lipid storage
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0019915 lipid storage
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009617Seipin familyPFAMPF06775Seipincoord: 31..240
e-value: 4.1E-51
score: 173.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 264..369

Blast
[Close]
BLAST of TCONS_00006539-protein vs. Swiss-Prot (Human)
Match: BSCL2 (Seipin OS=Homo sapiens GN=BSCL2 PE=1 SV=3)

HSP 1 Score: 179.489 bits (454), Expect = 9.378e-53
Identity = 101/241 (41.91%), Postives = 152/241 (63.07%), Query Frame = 0 
Query:   18 LMQSGWKLYWVGIYALIVSLMMYATFHVMYLPPSEHTLDVHFVYKTDCDSASTQELCSFPTGNVKLHRRPHSKEAKNAHRVLTRGQGYDVSLELDMPLSDINQNLGMFLIQLEFLHKDNSVVDSHSRSGLLNFQSSLLQTMSTVFYIVPLLTGWKEERQKLNIPLVENYIDDSYSPTFSINVTLHSKRIQIYGAKLRLKALFTGLRYYMHHWPMTFSAMG----FTFVLSSVFLVSLFRFI 254
            L+Q G  L+   +  L VS+ +Y +F+  Y+P   H   VHF Y+TDCDS ST  LCSFP  NV L     +K  ++  RVL  GQ Y V+LEL++P S +NQ+LGMFL+ +    +   ++ + SRS +L+++S LLQ + T+ +   LL G+ E++Q L + L  +Y ++SY PT    + +HSKRIQ+YGA LR+ A FTGLRY ++++PMT + +G    FTF LS + L S  +++
Sbjct:   28 LLQFG-VLFCTILLLLWVSVFLYGSFYYSYMPTVSHLSPVHFYYRTDCDS-STTSLCSFPVANVSL-----TKGGRD--RVLMYGQPYRVTLELELPESPVNQDLGMFLVTISCYTRGGRIISTSSRSVMLHYRSDLLQMLDTLVFSSLLLFGFAEQKQLLEVELYADYRENSYVPTTGAIIEIHSKRIQLYGAYLRIHAHFTGLRYLLYNFPMTCAFIGVASNFTF-LSVIVLFSYMQWV 258
The following BLAST results are available for this feature:
BLAST of TCONS_00006539-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
BSCL29.378e-5341.91Seipin OS=Homo sapiens GN=BSCL2 PE=1 SV=3[more]
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