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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00006076-protein ID=TCONS_00006076-protein|Name=TCONS_00006076-protein|organism=Clytia hemisphaerica|type=polypeptide|length=2775bp
MASNTTRHEMVDESSIHVLDFVYPPGETSENISSSITNELIRHFGNSVFV
NDNVKSPQNDTAAATSSKNKPQTDDAKQKENQKKNNLVTNHKLFDISNFR
ENVVDIAVNKKFLCILFDDGSVHRATCFVPDIKDSLSGKHSIKSEFQLSQ
GRPEPLQVASDESFARTLDRTLNNLNEEVATTISARRSYSLNTQGPTPRN
VFINNPYGLRGFSPDFASTALHYMPTMPYRQRRIQWNHLMNVPQNPSATS
IIYPQNSEELSQENIEIQDEPQMDLINNITIVSLDSESTPEFQITGLQAN
MPSQPGMNFPLPNTGISTPTAEREGDMSQSGSQENLQSNIFPQTTSSPTI
PMPQRSSMNFPFAKNQNEQSIAGPSGTPTTGYSPKKHQSKQEGSNSQDSF
ASSRYTPSPLFIKKEPDWSSELGNLQESGLMGQQQFMKMTAMESCFLLID
EEGHLWIWYNDMSQPIKAPFAWNKTKTIIAIGCNMFRATVLLESNQLVTF
YDKSFKDYNGKEEPELISKLSHGPTNFTEFHDEEILDIQCTNFYTGIQTA
QGKVYWWGLAPSAERNSSKGTSKSRFGDNLEIKIGDMVTPKLEKNEMGCL
VFNNVLHKFGIVVHYVRGENTTSTQGGVNTDKIVIACLDRDTFNIATDDM
IKTFSRVWDAKDVVFLQEQSISTGQVVSFDGQYAIVKMKSNDQGSDLKVY
LKSSLEKVATSNESNAKQTRYKKFMMEKPLQVFTNPDFIVVAITANEVGL
SFLVNRIKDGKAFLIHPSSVTNDHNNKWFTCGKSDINKSDNIKSECTVTT
EFESTPAEESRLCVKQCKSVDILQKDNTLLDHVSNGNIFDTSGVTDDALL
KSNTLRELDSALNQPAGNTHGSFSRSFSMPTGGKNDINLKRKWRNTVNIG
LSDSATNIVQKPKMFSFGDSQNYTCLLFDNMNCLYPVQFDCSLCNPALLE
ILPMKSFVLLDRGLQKDKRLLTLIAVPKKSSLITALSKGDKQTVQKAVFK
MEIALEDKDIGDDLKPYKRAKYEDSGKLPKSKLDVLRYLDERCNGNQNIM
HVAASNILKTDVKIPLLGSIMDVRNNEENVMLQTFLNSPLIWPKIRELLC
ERDSHGCTPFLTAIMMHNLRGADLILEAVKRDGKNEAKHVTPVDKTFFRK
AICQPAFSGLTPVHALIHCSSKKQSSQRWFSTLKISNLPPSYSPRLLLKL
FKSRYPSAYRAIMPIPESQWPQRNVRKKLAGGIICNQNTEEQPTSTKPKT
KHGPTPFPRMPSTTHHRYVSQAGVSGVYRHLSSRASANYANRADMLRANA
KEGLVMFGSINEMYQALTEMNNHSLLTKADHPSGALLSVVQHLLQVELYQ
EKTKFGVQSSSNSGGTTSTTSSAYSAKPNFIPNPLLGDLPYDVSSPGQRL
ASAGGSGVGGGSTTSEIPPIMREQTINKCFDDIMVHLLMTSLVAADSNIL
SSVNGEGDTAISYFLTTYPRYSPSHLHKLFLNWRPCNTTNCKYNRHVGNI
TITSQREVDPPKAPTSDDRSTSRSSSQQSGLSASTNEDDRKLSGHQSQKR
KMGENPILTRRGLQNRTGSLRLNVKDKATHSNDYASSPVTPSIRLIANLK
FGPIEVNSCSGLTPQIMHPQTASDNMHEGQGGTSRKGASNLSPFFPIPGQ
DRSQVMVSPTPTEDECKCHLNKARLLWNTTFQASVFYLAKNWPCIVSSIM
CWQSNSSSDLTFVDCNKLDILVENLLTNPYSILLEAFIKSLMNRFIESKI
SENAILLPTLHRLNPIDQNAFCGKTFNSLLPWLTVHRFVRSLVRQLSIFL
SKNTMPDGNLKLKIGRHANKNHAKKESKMRECLNLCLRAFSWISVIEILK
AANTMLRPIRLGTVKAQPKDIIRDIHNVGQPPVGRSHLPTGVRMYIPPGG
ATTSTRQNIRYASRRVTREVSLVPGNATAMLVEDHEPRDSNTPSKSSARP
GPSVGAPSRVVPQGPSSSSSNVPEDDTSDNDETINIDDPFLFAPENAGVV
GENFERTETDINEIDWTHTQGITPDSSLAWALDGHIRMRNEVSSRLFTQT
GLWQTYQNNQIHQQIMNTPSVHAGYLYLSRMFCRLVKEATDIAKSIQQSQ
EEVVPGLFGIKPIEFSADVRKALQEEANEQLASTWSWMKEILTTLEDQLN
RGDQFDTKHFVLRLKKTAPEGDIAGLGRPPMTHIYGSSPDEYMMYLLKQQ
MGEDQDTLPVIDLFSYTHLTYVLDAYLYLNKSRAFNPASASSARDNSQED
HDSNVDKEEVNFFKPCINLRSKQGSHVGKMQQFLQHTDEKLITANQIFMW
LDENVLKKQKLKKESQTLAICEGKWGRVIDAFSTLFLSEGPGYERESFLS
IKAGASGRIARFQRTLTSIRGTDTSRRSYNMMQDNPALLINIHRSNLLND
CINVFSENMANHPFGGLRVRFEGEEGTGPGVTRGLFAAFANALKSGEKYK
HWPTEFFTECGNLPTQKGVFSPKVGKYLLQESNFIFEHPMTQEKRYTAFV
AIGRFLGLTLWFNQTIPLILSRPILLYLLGKENEISFDDFAFYDSAMYKS
FSQLLVDAMSNECGNDEFIDRYNLCFEVTVDGHTESLVPNGQNLRVSKQN
ALQFVRLFAHHKMIGCRENELQGLKDGLHQMIPKELLDSLEAEDFQLLLS
GGVEEISYQRLRSIITFSNSRGCSRQLLERYKSWFWRILQKMSPSERQKL
LYFATGSSVLPALDNRVGNNEELSITVDIINNANSAALPMSSTCGQRISM
PLYPSKSVLRSKLLQAIECQTYGLG Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004842 | ubiquitin-protein transferase activity |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0004842 |
ubiquitin-protein transferase activity |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR000569 | HECT domain | SMART | SM00119 | hect_3 | coord: 2408..2775
e-value: 1.1E-42
score: 157.8 |
| IPR000569 | HECT domain | PFAM | PF00632 | HECT | coord: 2480..2772
e-value: 3.2E-49
score: 168.0 |
| IPR000569 | HECT domain | PROSITE | PS50237 | HECT | coord: 2467..2775
score: 50.879 |
| IPR000569 | HECT domain | SUPERFAMILY | 56204 | Hect, E3 ligase catalytic domain | coord: 2383..2768 |
| None | No IPR available | GENE3D | 3.30.2160.10 | | coord: 2549..2614
e-value: 3.7E-7
score: 29.5 |
| None | No IPR available | GENE3D | 3.90.1750.10 | | coord: 2355..2548
e-value: 6.7E-22
score: 77.3 |
| None | No IPR available | GENE3D | 3.30.2410.10 | | coord: 2654..2775
e-value: 5.3E-19
score: 68.0 |
| None | No IPR available | GENE3D | 2.130.10.30 | | coord: 53..830
e-value: 2.4E-19
score: 69.0 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 308..406 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1355..1375 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1238..1263 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1922..1987 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1502..1585 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1620..1639 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 55..86 |
| IPR009091 | Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II | SUPERFAMILY | 50985 | RCC1/BLIP-II | coord: 434..560 |
Blast
BLAST of TCONS_00006076-protein vs. Swiss-Prot (Human)
Match: UBR5 (E3 ubiquitin-protein ligase UBR5 OS=Homo sapiens GN=UBR5 PE=1 SV=2) HSP 1 Score: 193.741 bits (491), Expect = 7.594e-49 Identity = 113/315 (35.87%), Postives = 178/315 (56.51%), Query Frame = 0
Query: 2464 PTQKGVFSPKVGKYLLQESNFIFEHPMTQEKRYTAFVAIGRFLGLTLWFNQTIPLILSRPILLYLLGKENEISFDDFAFYDSAMYKSFSQLLVDAMSNECGNDEFIDRYNLCFEVTV----DGHTESLVPNGQNLRVSKQNALQFVRLFAHHKMIGCRENELQGLKDGLHQMIPKELLDSLEAEDFQLLLSGGVEEISYQRLRSIITFSNSRGCSRQLLERYKSWFWRILQKMSPSERQKLLYFATGSSVLPALDNRVGNNEELSITVDIINNANSAALPMSSTCGQRISMPLYPSKSVLRSKLLQAIECQTYGL 2774
P ++G ++P+ GK E R F IGR LGL L N+ P+ L+R ++ LLG++ +++ DFAF+D MY+S QL++ + S++ D +L F + + G L+PNG N+ V+ QN ++VR +A H+M+ E L ++ GL ++PK L+ L AEDF+LL++ G E++ Q L S +F++ G + + L ++K WFW I++KMS +ERQ L+YF T S LPA + G SIT I + LP ++TC R+ +PLY SK +L+ KLL AI+ + +G
Sbjct: 2508 PGKRGFYTPRPGK--------------NTEARLNCFRNIGRILGLCLLQNELCPITLNRHVIKVLLGRK--VNWHDFAFFDPVMYESLRQLILASQSSDA--DAVFSAMDLAFAIDLCKEEGGGQVELIPNGVNIPVTPQNVYEYVRKYAEHRMLVVAEQPLHAMRKGLLDVLPKNSLEDLTAEDFRLLVN-GCGEVNVQMLISFTSFNDESGENAEKLLQFKRWFWSIVEKMSMTERQDLVYFWTSSPSLPASEE--GFQPMPSIT---IRPPDDQHLPTANTCISRLYVPLYSSKQILKQKLLLAIKTKNFGF 2798
The following BLAST results are available for this feature:
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