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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00005649-protein ID=TCONS_00005649-protein|Name=TCONS_00005649-protein|organism=Clytia hemisphaerica|type=polypeptide|length=600bp
MADKVRRLTFSTPGFFKNLVSKTTQNGQNHDESSRRTLSDPGADYIPSYN
QSIQQDLDNLVSEDSGNLSSPEVEQQSGLIANSSFLRLNRAHWKDKSKFN
HCHRCAKPFGFAERKYNCRRCGEVFCEKCCQYRKRLNADCQPDPQGNIHR
VCYNCSDLHTQALGECKSLTEEFIECRKNKRIIVCEELDRLVTGFADNVR
PDQKLKNFADSLLGIKVPEWQKTQKWLESQEVEWCTKCQSKFTIFNVKHH
CRVCGSVFCRFCCKNDLLLYYDEHGRSTARLINVVGCPDKEPTTCSYLPV
CILCHADLEEYQVQQFHLIINEVDGEEGNIGHVSLILERLRNVERKLETT
LPRFQEKVEAYLYEQQYETVAGESKVTDFAKLQGDISDLFSKYTAIIQGL
KQIQLTSPTEIRIMKNIVHVKCASYNDQMNLFKKLKSTLNKSLPAEELEQ
LLEYTNTQAINNTYVTARQLGFEALALAEKYDFDTEIAERLSEIDAVCFQ
ELKKFVLSTGDDWAIHHKILNSLLKDQLAKKKLVSPSQRAVQKQGPEYVR
RFLIQRTFTLVYQISTALKAKSSEEKFQQSKEALKVLLNDLNEMVNPNCY Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0046872 | metal ion binding |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0046872 |
metal ion binding |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 337..357 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 21..45 |
| None | No IPR available | CDD | cd15760 | FYVE_scVPS27p_like | coord: 92..155
e-value: 8.78195E-15
score: 68.8628 |
| IPR000306 | FYVE zinc finger | SMART | SM00064 | fyve_4 | coord: 88..161
e-value: 9.7E-13
score: 58.3
coord: 221..310
e-value: 1.2E-11
score: 54.7 |
| IPR000306 | FYVE zinc finger | PFAM | PF01363 | FYVE | coord: 92..157
e-value: 4.9E-12
score: 45.7
coord: 225..309
e-value: 9.9E-13
score: 47.9 |
| IPR013083 | Zinc finger, RING/FYVE/PHD-type | GENE3D | 3.30.40.10 | | coord: 81..164
e-value: 2.9E-14
score: 52.2
coord: 216..315
e-value: 1.3E-14
score: 53.3 |
| IPR017455 | Zinc finger, FYVE-related | PROSITE | PS50178 | ZF_FYVE | coord: 96..160
score: 11.416 |
| IPR017455 | Zinc finger, FYVE-related | PROSITE | PS50178 | ZF_FYVE | coord: 229..309
score: 10.42 |
| IPR011011 | Zinc finger, FYVE/PHD-type | SUPERFAMILY | 57903 | FYVE/PHD zinc finger | coord: 92..164 |
| IPR011011 | Zinc finger, FYVE/PHD-type | SUPERFAMILY | 57903 | FYVE/PHD zinc finger | coord: 225..312 |
Blast
The following BLAST results are available for this feature:
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