TCONS_00005526-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00005526-protein
Unique NameTCONS_00005526-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length364

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00005526-protein ID=TCONS_00005526-protein|Name=TCONS_00005526-protein|organism=Clytia hemisphaerica|type=polypeptide|length=364bp
MTKLAVLTSSHTGVLKEEFLGIESGEEKLPRPKKITKKSRHTTGAVSSTH
QSNSNKEKSLLKKDVFWQISEPVDTQENMDYFLSSLMVNEEFSFSDDFLN
ELDLTPTIVPTTTRQNLTVQQQSLNQAFPIVDNCENHRQRQSFDSVSSTS
DDSLGSMESVEEPYNMVKVPNFNQNQYHKESHTLKLPSYDYCATAQKEQY
CQMNTKPTLHNIESKTINRGGSAKRPSNSRRQSGATSKRKIDSVYNNDPY
LQRHRLLVNARQKNRMMKINNMYTMLNSLIPEQVLCEANVKPHSKLGILK
RAIVYWSSLADTLNTPAPTPVDADSMLMENDQTSSLLNTVPIKKEEQPEQ
SNYCLMSTLNNLSN
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_003144XLOC_003144Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00005526TCONS_00005526Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011598bHLH_dom
Vocabulary: Molecular Function
TermDefinition
GO:0046983protein dimerization activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0046983 protein dimerization activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainSMARTSM00353finuluscoord: 259..315
e-value: 0.0034
score: 26.6
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainGENE3D4.10.280.10coord: 220..316
e-value: 5.1E-7
score: 29.1
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPFAMPF00010HLHcoord: 259..309
e-value: 7.5E-7
score: 28.9
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPROSITEPS50888BHLHcoord: 253..309
score: 10.105
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainCDDcd00083HLHcoord: 255..305
e-value: 7.50309E-4
score: 36.0379
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainSUPERFAMILY47459HLH, helix-loop-helix DNA-binding domaincoord: 253..314
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 211..243
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 26..57

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00005526-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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