TCONS_00005459-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00005459-protein
Unique Name	TCONS_00005459-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	820

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00005459-protein ID=TCONS_00005459-protein|Name=TCONS_00005459-protein|organism=Clytia hemisphaerica|type=polypeptide|length=820bp
MVKSNQVTPLGQRKHKDRIGDVKDKNDTKEEVQSENPLPSPGVAAPTVDL
RTGSPLLPNKYGSANTSPTHQKGDQQLTKLRVQNICCGKEATLVKNTLAD
LPGILSVNINVIGRIAYVKHEPAVISTTQIIDKLNALHLGISLMESGQDA
ATKENARAKRWIWIRAASVITQTLLFCAIITATALKENWDKWVAIPILIL
GGAPMIYKAAIDVKRCVIANVNLLMLIAVTGTLVLREWLDGCLIVYVFSI
AELLLMICYYNVEKGLSALLVSAPSTVLLAETNQSVDIKEVAMGTVILVC
AGEQIPLDGKVIKGKAAVDESSITGEATPVGKSTDSTVFSGTVIQSGYLK
IETTSDYKTSTLSRVSEYIEEAKAASSNTEEILNRFAKFYTPLIVGVALL
IFIVPLIVGKVKNGFTTEDMKIWSTRALKVLVVACPCSLIIAVPVTMISG
ISRASKDGILVKGAQFLEKMASIQMFCFDKTGTLTEGRFQVVAEHHVSGE
RSDAVMYAAALETKSSHPVAAAIVNHFSGCITDKIEQFGSQINLPDVTKF
KNEAGMGLSGVVSEKEVLVGNLDLMQLYSVLVSDKEKTLLEDWSNMGRTV
VFVANEGRLSLILGLADKVRDSSRETIQGLTQHNVRCCMLTGDTEGPARL
ISNETGIVEYSFSMKPHEKYEWLVSKQKQDKLKVAMCGDGVNDCPSLAAA
DVGIAIGPTATGLAVDSAGITLMSDDLSRVVTLLLLAKYCRTIVFQNIIG
SIIIKVIFVAVALAKNGMLWLAIIADVTGLLFVIVNGIRPMYFNNATEKS
KVVLVESMKKLEEKDGSKLI

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_003106	XLOC_003106	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00005459	TCONS_00005459	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR027256	P-typ_ATPase_IB
IPR001757	P_typ_ATPase
IPR023299	ATPase_P-typ_cyto_domN
IPR018303	ATPase_P-typ_P_site
IPR006121	HMA_dom
IPR023298	ATPase_P-typ_TM_dom
IPR023214	HAD-like_dom
IPR008250	ATPase_P-typ_transduc_dom_A

Vocabulary: **Molecular Function**
Term	Definition
GO:0019829	cation-transporting ATPase activity
GO:0000166	nucleotide binding
GO:0046872	metal ion binding

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

Vocabulary: **Biological Process**
Term	Definition
GO:0006812	cation transport
GO:0030001	metal ion transport

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006812	cation transport
biological_process	GO:0030001	metal ion transport
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0019829	cation-transporting ATPase activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0000166	nucleotide binding

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00119	CATATPASE	coord: 477..491 score: 61.9 coord: 633..643 score: 41.94 coord: 687..706 score: 62.3 coord: 711..723 score: 26.69 coord: 319..333 score: 53.09
None	No IPR available	GENE3D	1.20.1110.10		coord: 236..489 e-value: 1.7E-30 score: 105.6
None	No IPR available	PFAM	PF00702	Hydrolase	coord: 474..701 e-value: 3.9E-27 score: 95.8
None	No IPR available	GENE3D	1.20.1110.10		coord: 655..801 e-value: 9.6E-20 score: 69.9
None	No IPR available	PFAM	PF00122	E1-E2_ATPase	coord: 274..456 e-value: 8.6E-47 score: 158.9
None	No IPR available	GENE3D	3.30.70.100		coord: 74..150 e-value: 1.2E-8 score: 34.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..74
IPR027256	P-type ATPase, subfamily IB	TIGRFAM	TIGR01525	TIGR01525	coord: 221..789 e-value: 5.2E-148 score: 492.3
IPR001757	P-type ATPase	TIGRFAM	TIGR01494	TIGR01494	coord: 246..763 e-value: 6.2E-64 score: 214.1
IPR023299	P-type ATPase, cytoplasmic domain N	GENE3D	3.40.1110.10		coord: 490..654 e-value: 5.2E-33 score: 114.0
IPR018303	P-type ATPase, phosphorylation site	PROSITE	PS00154	ATPASE_E1_E2	coord: 479..485
IPR006121	Heavy metal-associated domain, HMA	PROSITE	PS50846	HMA_2	coord: 77..143 score: 11.08
IPR006121	Heavy metal-associated domain, HMA	SUPERFAMILY	55008	HMA, heavy metal-associated domain	coord: 73..146
IPR023298	P-type ATPase, transmembrane domain	SUPERFAMILY	81665	Calcium ATPase, transmembrane domain M	coord: 370..471 coord: 220..275 coord: 728..784
IPR023214	HAD-like domain	SUPERFAMILY	56784	HAD-like	coord: 475..495 coord: 543..787
IPR008250	P-type ATPase, A domain	SUPERFAMILY	81653	Calcium ATPase, transduction domain A	coord: 276..367

Blast

[Close]

BLAST of TCONS_00005459-protein vs. Swiss-Prot (Human)
Match: ATP7A (Copper-transporting ATPase 1 OS=Homo sapiens GN=ATP7A PE=1 SV=3)

HSP 1 Score: 219.55 bits (558), Expect = 2.463e-59
Identity = 209/832 (25.12%), Postives = 378/832 (45.43%), Query Frame = 0

Query:   72 KGDQQLTKLRVQNICCGKEATLVKNTLADLPGILSVNINVIGRIAYVKHEPAVISTTQIIDKLNALHLGISLMESGQDAATKENARAKRWIWIRAASVITQTLLFCAIITATAL--------------KENWDK----------------------------WVAIPILILGGAPMIYKAAIDVKRCVIANVNLLMLIAVTGTLVLR-----------------EWLDGCLIVYVF-SIAELLLMICYYNVEKGLSAL--LVSAPSTVLLAETN------QSVDIKEVAMGTVILVCAGEQIPLDGKVIKGKAAVDESSITGEATPVGKSTDSTVFSGTVIQSGYLKIETTSDYKTSTLSRVSEYIEEAKAASSNTEEILNRFAKFYTPLIVGVALLIFIVPLIVGK-----VKNGFTTEDMKIWSTR---------ALKVLVVACPCSLIIAVPVTMISGISRASKDGILVKGAQFLEKMASIQMFCFDKTGTLTEG-----RFQVVAE-HHVSGERSDAVMYAAALETKSSHPVAAAIVNHFSGCITD-KIEQFGSQINLPDVTKFKNEAGMGLSGVVSEKEVL------------VGNLDLMQL---------------------------YSVLVSDKE-------------KTLLEDWSNMGRTVVFVANEGRLSLILGLADKVRDSSRETIQGLTQHNVRCCMLTGDTEGPARLISNETGIVEYSFSMKPHEKYEWLVSKQKQDKLKVAMCGDGVNDCPSLAAADVGIAIGPTATGLAVDSAGITLMSDDLSRVVTLLLLAKYCRTIVFQNIIGSIIIKVIFVAVA 762
            +GD  L +L V+ + C      ++++L    GIL  ++ +    A++K++P +I    II  + +L    SL++  + A+  ++ R  R  W R+  V   +L FC  +    +               +N  K                             + +P+   GG    Y  A    +   AN+++L+++A T                        + D   +++VF ++   L  I      + L+ L  L +  +T++  +++      + VD++ V  G +I V  G + P+DG+VI+G + VDES ITGEA PV K   STV +G++ Q+G L I  T     +TLS++ + +EEA+ + +  ++  ++ + ++ P IV V++   +V +++G      V+  F   +  I  T          ++ VL +ACPCSL +A P  ++ G    +++GIL+KG + LE    +++  FDKTGT+T G     + +V+ E + +S  +  A++  A  E+ S HP+  AI  +   C  +   E  G+ I+      F+   G G+S  V+  E L            + N  L+Q+                           Y VL+ ++E                + +    GRT V VA +  L  ++ +AD V+  +   I  L    +   ++TGD    AR I+++ GI +    + P  K   +   Q++ K +VAM GDG+ND P+LA A+VGIAIG T T +A+++A + L+ +DL  VV  + L++     +  N + ++I  ++ + +A
Sbjct:  561 EGDGVL-ELVVRGMTCASCVHKIESSLTKHRGILYCSVALATNKAHIKYDPEIIGPRDIIHTIESLGFEASLVKKDRSASHLDHKREIRQ-WRRSFLV---SLFFCIPVMGLMIYMMVMDHHFATLHHNQNMSKEEMINLHSSMFLERQILPGLSVMNLLSFLLCVPVQFFGGW-YFYIQAYKALKHKTANMDVLIVLATTIAFAYSLIILLVAMYERAKVNPITFFDTPPMLFVFIALGRWLEHIAKGKTSEALAKLISLQATEATIVTLDSDNILLSEEQVDVELVQRGDIIKVVPGGKFPVDGRVIEGHSMVDESLITGEAMPVAKKPGSTVIAGSINQNGSLLICATHVGADTTLSQIVKLVEEAQTSKAPIQQFADKLSGYFVPFIVFVSIATLLVWIVIGFLNFEIVETYFPGYNRSISRTETIIRFAFQASITVLCIACPCSLGLATPTAVMVGTGVGAQNGILIKGGEPLEMAHKVKVVVFDKTGTITHGTPVVNQVKVLTESNRISHHKILAIVGTA--ESNSEHPLGTAITKY---CKQELDTETLGTCID------FQVVPGCGISCKVTNIEGLLHKNNWNIEDNNIKNASLVQIDASNEQSSTSSSMIIDAQISNALNAQQYKVLIGNREWMIRNGLVINNDVNDFMTEHERKGRTAVLVAVDDELCGLIAIADTVKPEAELAIHILKSMGLEVVLMTGDNSKTARSIASQVGITKVFAEVLPSHKVAKVKQLQEEGK-RVAMVGDGINDSPALAMANVGIAIG-TGTDVAIEAADVVLIRNDLLDVVASIDLSRETVKRIRINFVFALIYNLVGIPIA 1373

The following BLAST results are available for this feature:

BLAST of TCONS_00005459-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00005459-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
ATP7A	2.463e-59	25.12	Copper-transporting ATPase 1 OS=Homo sapiens GN=AT...	[more]

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TCONS_00005459-protein (polypeptide) - C. hemisphaerica