TCONS_00005454-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00005454-protein
Unique NameTCONS_00005454-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length452

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00005454-protein ID=TCONS_00005454-protein|Name=TCONS_00005454-protein|organism=Clytia hemisphaerica|type=polypeptide|length=452bp
ETSSELFLFYRSTRFNKLHQIFSFFIFIFFRNVLKIKSNDNMTKLLFPIA
INALYSLFSFFLALRLIPGAKDLFLKAGLKGKDLNKKEKNEIPESLGVIC
GTVFLICMFLFIPVPFVTRWMENMVGQEQTVFPHNEFVEFIAALLSICCM
ILLGYADDTLDLKWRYKLILPTLASLPLLMVYFVNFGSTTIVIPKPLRDI
IGINLNLGIFYYVYMGMLAVFCTNAINILAGVNGLETSQSVIIGISILVF
NFMELSGDCWKSHLFSIYFLLPYVAASSALLYHNWYPSSVFVGDTFCYFS
GMTFAVVAILGHFSKTMLLFFIPQILNFLYSVPQLFRFIPCPRHRLPSYD
SKTDKLELSTTQFKTEDLNILGKIIVKIVSTFRIGFVQNKKIDKDEYTVM
SNLTLINFVIFVLGPMHEKRVTQVLMAIQVLGSCLAFFVRYQLARLFYDT
IK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_003103XLOC_003103Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00005454TCONS_00005454Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000715Glycosyl_transferase_4
IPR033895GPT
Vocabulary: Molecular Function
TermDefinition
GO:0008963phospho-N-acetylmuramoyl-pentapeptide-transferase activity
GO:0003975UDP-N-acetylglucosamine-dolichyl-phosphate N-acetylglucosaminephosphotransferase activity
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Biological Process
TermDefinition
GO:0006488dolichol-linked oligosaccharide biosynthetic process
GO:0006487protein N-linked glycosylation
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006488 dolichol-linked oligosaccharide biosynthetic process
biological_process GO:0006487 protein N-linked glycosylation
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0008963 phospho-N-acetylmuramoyl-pentapeptide-transferase activity
molecular_function GO:0003975 UDP-N-acetylglucosamine-dolichyl-phosphate N-acetylglucosaminephosphotransferase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000715Glycosyl transferase, family 4PFAMPF00953Glycos_transf_4coord: 141..311
e-value: 1.1E-34
score: 119.7
IPR033895UDP-GlcNAc-dolichyl-phosphate GlcNAc phosphotransferaseCDDcd06855GT_GPT_eukcoord: 67..359
e-value: 9.55532E-146
score: 419.344

Blast
[Close]
BLAST of TCONS_00005454-protein vs. Swiss-Prot (Human)
Match: GPT (UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase OS=Homo sapiens GN=DPAGT1 PE=1 SV=2)

HSP 1 Score: 491.5 bits (1264), Expect = 3.533e-173
Identity = 237/407 (58.23%), Postives = 308/407 (75.68%), Query Frame = 0 
Query:   43 TKLLFPIAINALYSLFSFFLALRLIPGAKDLFLKAGLKGKDLNKKEKNEIPESLGVICGTVFLICMFLFIPVPFVTRWMENMVGQEQTVFPHNEFVEFIAALLSICCMILLGYADDTLDLKWRYKLILPTLASLPLLMVYFVNFGSTTIVIPKPLRDIIGINLNLGIFYYVYMGMLAVFCTNAINILAGVNGLETSQSVIIGISILVFNFMELSGDCWKSHLFSIYFLLPYVAASSALLYHNWYPSSVFVGDTFCYFSGMTFAVVAILGHFSKTMLLFFIPQILNFLYSVPQLFRFIPCPRHRLPSYDSKTDKLELSTTQFKTEDLNILGKIIVKIVSTFRIGFVQNKKIDKDEYTVMSNLTLINFVIFVLGPMHEKRVTQVLMAIQVLGSCLAFFVRYQLARLFYD 449
            ++L  P+ IN + SL  F   + LIP  +  F+ A L G+DLNK  + +IPES GVI G VFLI +F FIP PF    +   V ++   FPH+EFV  I ALL+ICCMI LG+ADD L+L+WR+KL+LPT ASLPLLMVYF NFG+TTIV+PKP R I+G++L+LGI YYVYMG+LAVFCTNAINILAG+NGLE  QS++I  SI+VFN +EL GDC   H+FS+YF++P+   +  LLYHNWYPS VFVGDTFCYF+GMTFAVV ILGHFSKTMLLFF+PQ+ NFLYS+PQL   IPCPRHR+P  + KT KLE+S ++FKT+ L+ LG  I+K+  + ++  V   + +  E+T  +N+TLIN ++ VLGP+HE+ +T +L+ +Q+LGS + F +RYQL RLFYD
Sbjct:    5 SELPMPLLINLIVSLLGFVATVTLIPAFRGHFIAARLCGQDLNKTSRQQIPESQGVISGAVFLIILFCFIPFPF----LNCFVKEQCKAFPHHEFVALIGALLAICCMIFLGFADDVLNLRWRHKLLLPTAASLPLLMVYFTNFGNTTIVVPKPFRPILGLHLDLGILYYVYMGLLAVFCTNAINILAGINGLEAGQSLVISASIIVFNLVELEGDCRDDHVFSLYFMIPFFFTTLGLLYHNWYPSRVFVGDTFCYFAGMTFAVVGILGHFSKTMLLFFMPQVFNFLYSLPQLLHIIPCPRHRIPRLNIKTGKLEMSYSKFKTKSLSFLGTFILKVAESLQLVTVHQSETEDGEFTECNNMTLINLLLKVLGPIHERNLTLLLLLLQILGSAITFSIRYQLVRLFYD 407
The following BLAST results are available for this feature:
BLAST of TCONS_00005454-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GPT3.533e-17358.23UDP-N-acetylglucosamine--dolichyl-phosphate N-acet... [more]
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