TCONS_00005424-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00005424-protein
Unique Name	TCONS_00005424-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	403

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00005424-protein ID=TCONS_00005424-protein|Name=TCONS_00005424-protein|organism=Clytia hemisphaerica|type=polypeptide|length=403bp
MKVMLAIAFLLSLMKTIHTCGTSTHISIAHEAATFYQGPLDAKVDYASLI
QKHQDAFVAGNPYPDAMYPSVCFGGKYHEVAEDTHWAPFLNATVNYIRRK
YPQPWDEATEKLVAFTFGYISHQVADISWHSLAGFKQGFIQAMANVNFHG
VFDKAHTDADIGGDMLTQFDNSDDPIGSNTWYVPVDDLYEIYKEFYGGNQ
TIPKTVIELCSELLYIEYIAEKFAGAKIFKPFVKKSPFLLNQLDNYFLGG
IHDMAAWTSKIWNETVFMLEHGTSACNMERSTMHVNCTGYLPAHNGQSVM
ARKNPGRGYPHKNGGWSYNDVHKTKSLRGVYFTPGDKMAEYITGATEKRK
KVLGQTETSEHSYSQIGKSMEEIKTPDDTYYLVISAPTYSDLGRPSIGKV
WFI

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_003090	XLOC_003090	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00005424	TCONS_00005424	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001028	Gprt_PLipase_D
IPR029002	PLPC/GPLD1

Vocabulary: **Molecular Function**
Term	Definition
GO:0004621	glycosylphosphatidylinositol phospholipase D activity

Vocabulary: **Cellular Component**
Term	Definition
GO:0005576	extracellular region

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005576	extracellular region
molecular_function	GO:0004621	glycosylphosphatidylinositol phospholipase D activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001028	Glycoprotein phospholipase D	PRINTS	PR00718	PHPHLIPASED	coord: 21..36 score: 53.12 coord: 162..175 score: 42.86 coord: 149..162 score: 37.5 coord: 77..98 score: 68.18
IPR029002	Phospholipase C/D	PFAM	PF00882	Zn_dep_PLPC	coord: 24..218 e-value: 1.7E-21 score: 76.9

Blast

[Close]

BLAST of TCONS_00005424-protein vs. Swiss-Prot (Human)
Match: PHLD (Phosphatidylinositol-glycan-specific phospholipase D OS=Homo sapiens GN=GPLD1 PE=1 SV=3)

HSP 1 Score: 293.508 bits (750), Expect = 1.301e-91
Identity = 169/421 (40.14%), Postives = 245/421 (58.19%), Query Frame = 0

Query:    7 IAFLLSLMKTIHTCGTSTHISIAHEAATFYQGPLDAKVDYASLIQKHQDAFVAGNPYPDAMYPSVCFGGKYHEVAEDTHWAPFLNATVNYIRRKYPQPWDEATEKLVAFTFGYISHQVADISWHSLAGFKQGFIQAMANVNFHGVFDKAHTDADIGGDMLTQFDNSDDPIGSNTWYVPVDDLYEIYKEFYGGNQTIPKTVIELCSELLYIEYIAEKFAGAKIFKPFVKKSPFLLNQLDNYFLGGIHDMAAWTSKIWNETVFMLEHGTSACNMERSTMHVNCTGYLPAHNGQSVMARKNPGRGYPHKNGGWSYN---DVHKTKSLRGVYF-----TPGDKMAEYITGATEK--RKKVLGQTETSEH-------------SYSQIGKSMEEIKTPDDTYY-LVISAPTYSDLGRPSIGKVWFI 403
            +  L SL      CG STH+ I H A  F Q   + +V+Y  L+ +HQDA+ AG  +PD  YPS+C GGK+H+V+E THW PFLNA+V+YIR  YP PW++ TEKLVAF FG  SH  AD+SWHSL G +QGF++ M  ++FHG + +AH+  D GGD+L+QF+ + + + +  WYVPV DL  IY++ Y G + I + VI  CS + ++E   E  A +K++  +  KSPFL+ Q   YFLGG+ DMA W++ I++ T FMLE+GTS CN+  + + + C G    H   S M + +      H+N   S     D +   + RGV+F     TP D M+ +I  A E+  R   +G ++ S+               Y+++G +M       D +  LV+ AP YS  G   IG+V+ I
Sbjct:   11 LIMLGSLCHRGSPCGLSTHVEIGHRALEFLQ-LHNGRVNYRELLLEHQDAYQAGIVFPDCFYPSICKGGKFHDVSESTHWTPFLNASVHYIRENYPLPWEKDTEKLVAFLFGITSHMAADVSWHSL-GLEQGFLRTMGAIDFHGSYSEAHSAGDFGGDVLSQFEFNFNYL-ARRWYVPVKDLLGIYEKLY-GRKVITENVIVDCSHIQFLEMYGEMLAVSKLYPTYSTKSPFLVEQFQEYFLGGLDDMAFWSTNIYHLTSFMLENGTSDCNLPENPLFIACGGQ-QNHTQGSKMQKND-----FHRNLTTSLTESVDRNINYTERGVFFSVNSWTP-DSMS-FIYKALERNIRTMFIGGSQLSQKHVSSPLASYFLSFPYARLGWAMTSADLNQDGHGDLVVGAPGYSRPGHIHIGRVYLI 419

The following BLAST results are available for this feature:

BLAST of TCONS_00005424-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00005424-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
PHLD	1.301e-91	40.14	Phosphatidylinositol-glycan-specific phospholipase...	[more]

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TCONS_00005424-protein (polypeptide) - C. hemisphaerica