TCONS_00005371-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00005371-protein
Unique NameTCONS_00005371-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length250

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00005371-protein ID=TCONS_00005371-protein|Name=TCONS_00005371-protein|organism=Clytia hemisphaerica|type=polypeptide|length=250bp
MSQKFAKNLLITGANRGIGLEFVKKLASRVDILFAGCRKPSEAKELNALK
DVHNNIHVVEIDVTCEKNIQACIEEVSKVCGEAGLSCLINNAGALIKPDD
KVTELTLEKFNHIFSVNIFGPSIVCKHSLNLLQQATKTHSDQIITKPLIV
NIGSDLSSVSIMDRNMGFYYSYNMSKSSLNMFTKMLSLEIEQDGIDVIAI
HPGWVQTDMGGANGTLTVQQXIDMMLETLSTLRQDQNGTLIDFKGETIPY
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_003049XLOC_003049Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00005371TCONS_00005371Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002347SDR_fam
IPR020904Sc_DH/Rdtase_CS
IPR016040NAD(P)-bd_dom
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0016491 oxidoreductase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002347Short-chain dehydrogenase/reductase SDRPRINTSPR00080SDRFAMILYcoord: 147..155
score: 43.46
coord: 83..94
score: 43.38
coord: 172..191
score: 29.19
IPR002347Short-chain dehydrogenase/reductase SDRPRINTSPR00081GDHRDHcoord: 8..25
score: 38.8
coord: 172..191
score: 28.4
coord: 193..210
score: 37.25
coord: 83..94
score: 42.89
IPR002347Short-chain dehydrogenase/reductase SDRPFAMPF00106adh_shortcoord: 7..211
e-value: 1.1E-29
score: 103.2
NoneNo IPR availableGENE3D3.40.50.720coord: 5..250
e-value: 9.1E-44
score: 149.1
NoneNo IPR availableCDDcd05325carb_red_sniffer_like_SDR_ccoord: 10..249
e-value: 3.8837E-76
score: 232.186
IPR020904Short-chain dehydrogenase/reductase, conserved sitePROSITEPS00061ADH_SHORTcoord: 159..187
IPR016040NAD(P)-binding domainSUPERFAMILY51735NAD(P)-binding Rossmann-fold domainscoord: 7..250

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00005371-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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