TCONS_00005168-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00005168-protein
Unique NameTCONS_00005168-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length627

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00005168-protein ID=TCONS_00005168-protein|Name=TCONS_00005168-protein|organism=Clytia hemisphaerica|type=polypeptide|length=627bp
MWFFERKMDKFLYLLLVWLGILCICSDRVFSAGDNKLEFIDKNMPQFVVY
PYGDTAILYCNATSTSPIRYRWYKNGRKLSGRSSSLITNSPYLIFKGLVL
TDTATYRCKAKIKGMKIEHDFKLIVKEKVVKGPYIDKDDGNYETVLTGSN
ASLPCDEIRSSTLPDFRWLRWNGAVNLTILNKIAQPGNGIKITELESMVE
IVPADRYRQVSKSKNGHRVHGVELMFPKVTVADRGFYTCLVLNHIGYDYK
TTYLSVENAIKPVIQRIRSKLFIAQLGTDFNFPECKVLFQSKPPAKITWE
KLFSTITNERHVIRGNRVMVKKVQHSDAGYYTCIARNSAGEDQVKILLRV
WPLVMNKTSAEIITRLRNETVEIFCSAYSHTQNMTGTIVRMGVPVPSAVE
RKKDNLFLVKAQVNEDGTYVCTIRYGNEKVQSASFVEKFHLKSVILNSTS
IEHLGKWLKESKQLGRYKACWDTNTYVPNINSEGMFFTKKYCGGKKNTIT
LIQIRDKWVSYYRTPNRDWDTTLGGFTEISWTQGTKANSTKTFMFEFNPP
KKYTPRFGGKNAICGYGSGPCFGNKNLYTAGFPPYAYGSRGNIWKIRGIW
YSRAVFDILKLNFAQGYPRRMEVFYRL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_002942XLOC_002942Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00005168TCONS_00005168Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003598Ig_sub2
IPR003599Ig_sub
IPR013151Immunoglobulin
IPR013783Ig-like_fold
IPR013098Ig_I-set
IPR007110Ig-like_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003598Immunoglobulin subtype 2SMARTSM00408igc2_5coord: 146..246
e-value: 0.02
score: 23.5
coord: 275..340
e-value: 0.0043
score: 26.3
coord: 51..115
e-value: 0.057
score: 19.0
IPR003599Immunoglobulin subtypeSMARTSM00409IG_3ccoord: 360..438
e-value: 2.2
score: 17.1
coord: 140..257
e-value: 2.0E-5
score: 34.0
coord: 45..126
e-value: 8.5E-9
score: 45.2
coord: 269..351
e-value: 0.37
score: 19.9
IPR013151ImmunoglobulinPFAMPF00047igcoord: 144..247
e-value: 8.1E-6
score: 25.8
NoneNo IPR availablePFAMPF13927Ig_3coord: 51..111
e-value: 5.1E-8
score: 33.3
NoneNo IPR availableCDDcd00096Igcoord: 56..122
e-value: 1.43147E-6
score: 45.5579
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 33..132
e-value: 9.3E-14
score: 50.8
coord: 133..263
e-value: 3.4E-11
score: 42.6
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 272..354
e-value: 7.3E-12
score: 44.7
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 355..440
e-value: 0.0016
score: 17.9
IPR013098Immunoglobulin I-setPFAMPF07679I-setcoord: 272..350
e-value: 1.3E-7
score: 31.5
IPR007110Immunoglobulin-like domainPROSITEPS50835IG_LIKEcoord: 133..257
score: 7.776
IPR007110Immunoglobulin-like domainPROSITEPS50835IG_LIKEcoord: 53..118
score: 9.137
IPR007110Immunoglobulin-like domainPROSITEPS50835IG_LIKEcoord: 262..347
score: 9.029
IPR007110Immunoglobulin-like domainSUPERFAMILY48726Immunoglobulincoord: 262..350
IPR007110Immunoglobulin-like domainSUPERFAMILY48726Immunoglobulincoord: 144..257
IPR007110Immunoglobulin-like domainSUPERFAMILY48726Immunoglobulincoord: 44..127

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00005168-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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