TCONS_00005015-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00005015-protein
Unique NameTCONS_00005015-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length373

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00005015-protein ID=TCONS_00005015-protein|Name=TCONS_00005015-protein|organism=Clytia hemisphaerica|type=polypeptide|length=373bp
MESASKMPAPVAENWCYTHVKVVKFSYMWTINNFSYCREEMGETLKSSTF
SAGANDKLKWCLRINPKGLDEESKDYLSLYLLLLACNKSEVRAKFKFSIL
NAKREETKAMESQRAYRFVQGKDWGFKKFIRRDFLMDEANGLLPEDKLTM
FCEVSVVADSVNVSGQSLMSNLKVPDSELADNMNNLLDTGNFSDMALKNN
NMTIPVHKAILAARSPVFAAMFQHDLEENKQGFVSITDLDIDVLREMLKF
IYTGKVTRLDAMADSLLAAADKYALDRLKVMCEEALASNLNVDNVCDVLV
LADLHNAQQLKSVAIDFTNSHAQEVMEHSSWQKLVKNHANIIAEAFRALA
SVQSFSCSPPRKRQKTARVEPCV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_002843XLOC_002843Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00005015TCONS_00005015Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000210BTB/POZ_dom
IPR002083MATH/TRAF_dom
IPR008974TRAF-like
IPR034089SPOP_C
IPR011333SKP1/BTB/POZ
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000210BTB/POZ domainSMARTSM00225BTB_4coord: 193..290
e-value: 1.3E-22
score: 91.2
IPR000210BTB/POZ domainPFAMPF00651BTBcoord: 183..289
e-value: 3.8E-27
score: 94.6
IPR000210BTB/POZ domainPROSITEPS50097BTBcoord: 193..260
score: 18.638
IPR002083MATH/TRAF domainSMARTSM00061math_3coord: 29..135
e-value: 4.1E-14
score: 62.9
IPR002083MATH/TRAF domainPFAMPF00917MATHcoord: 58..152
e-value: 1.1E-6
score: 28.7
IPR002083MATH/TRAF domainPROSITEPS50144MATHcoord: 24..154
score: 28.113
IPR008974TRAF-likeGENE3D2.60.210.10coord: 22..159
e-value: 2.6E-35
score: 121.1
IPR008974TRAF-likeSUPERFAMILY49599TRAF domain-likecoord: 22..163
NoneNo IPR availableGENE3D3.30.710.10coord: 178..330
e-value: 7.4E-42
score: 142.3
IPR034089SPOP, C-terminal BACK-like domainCDDcd14734SPOP_Ccoord: 290..351
e-value: 9.88892E-20
score: 80.6445
IPR011333SKP1/BTB/POZ domainSUPERFAMILY54695POZ domaincoord: 172..288

Blast
[Close]
BLAST of TCONS_00005015-protein vs. Swiss-Prot (Human)
Match: SPOP (Speckle-type POZ protein OS=Homo sapiens GN=SPOP PE=1 SV=1)

HSP 1 Score: 508.449 bits (1308), Expect = 0.000e+0
Identity = 247/359 (68.80%), Postives = 298/359 (83.01%), Query Frame = 0 
Query:    9 APVAENWCYTHVKVVKFSYMWTINNFSYCREEMGETLKSSTFSAGANDKLKWCLRINPKGLDEESKDYLSLYLLLLACNKSEVRAKFKFSILNAKREETKAMESQRAYRFVQGKDWGFKKFIRRDFLMDEANGLLPEDKLTMFCEVSVVADSVNVSGQSLMSNLKVPDSELADNMNNLLDTGNFSDMALKNNNMTIPVHKAILAARSPVFAAMFQHDLEENKQGFVSITDLDIDVLREMLKFIYTGKVTRLDAMADSLLAAADKYALDRLKVMCEEALASNLNVDNVCDVLVLADLHNAQQLKSVAIDFTNSHAQEVMEHSSWQKLVKNHANIIAEAFRALASVQSFSCSPPRKRQKTA 367
             PVAE+WCYT +KVVKFSYMWTINNFS+CREEMGE +KSSTFS+GANDKLKWCLR+NPKGLDEESKDYLSLYLLL++C KSEVRAKFKFSILNAK EETKAMESQRAYRFVQGKDWGFKKFIRRDFL+DEANGLLP+DKLT+FCEVSVV DSVN+SGQ+ M+ +KVP+  LAD +  L +   F+D  L         HKAILAARSPVF+AMF+H++EE+K+  V I D++ +V +EM+ FIYTGK   LD MAD LLAAADKYAL+RLKVMCE+AL SNL+V+N  ++L+LADLH+A QLK+ A+DF N HA +V+E S W+ +V +H +++AEA+R+LAS Q     PPRKR K +
Sbjct:   16 GPVAESWCYTQIKVVKFSYMWTINNFSFCREEMGEVIKSSTFSSGANDKLKWCLRVNPKGLDEESKDYLSLYLLLVSCPKSEVRAKFKFSILNAKGEETKAMESQRAYRFVQGKDWGFKKFIRRDFLLDEANGLLPDDKLTLFCEVSVVQDSVNISGQNTMNMVKVPECRLADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVEPEVFKEMMCFIYTGKAPNLDKMADDLLAAADKYALERLKVMCEDALCSNLSVENAAEILILADLHSADQLKTQAVDFINYHASDVLETSGWKSMVVSHPHLVAEAYRSLASAQCPFLGPPRKRLKQS 374
The following BLAST results are available for this feature:
BLAST of TCONS_00005015-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SPOP0.000e+068.80Speckle-type POZ protein OS=Homo sapiens GN=SPOP P... [more]
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