TCONS_00004649-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00004649-protein
Unique NameTCONS_00004649-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length102

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00004649-protein ID=TCONS_00004649-protein|Name=TCONS_00004649-protein|organism=Clytia hemisphaerica|type=polypeptide|length=102bp
MGLFGKTPKKDPKEQVREWSSGLRKEGRKLDRQIRTIKMEEAKVQRSIKD
AAKKGQKDVCTILAKEIIQSRKAVNKLYSAKAQLNSVDMQMKNQLEIKYL
YL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_002621XLOC_002621Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00004649TCONS_00004649Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005024Snf7_fam
Vocabulary: Biological Process
TermDefinition
GO:0007034vacuolar transport
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007034 vacuolar transport
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005024Snf7 familyPFAMPF03357Snf7coord: 18..94
e-value: 8.7E-13
score: 48.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..27

Blast
[Close]
BLAST of TCONS_00004649-protein vs. Swiss-Prot (Human)
Match: CHMP3 (Charged multivesicular body protein 3 OS=Homo sapiens GN=CHMP3 PE=1 SV=3)

HSP 1 Score: 134.42 bits (337), Expect = 5.441e-41
Identity = 67/97 (69.07%), Postives = 81/97 (83.51%), Query Frame = 0 
Query:    1 MGLFGKTPKKDPKEQVREWSSGLRKEGRKLDRQIRTIKMEEAKVQRSIKDAAKKGQKDVCTILAKEIIQSRKAVNKLYSAKAQLNSVDMQMKNQLEI 97
            MGLFGKT +K PKE V EWS  +RKE R +DRQIR I+ EE KV+RS+KDAAKKGQKDVC +LAKE+I+SRKAV+KLY++KA +NSV M MKNQL +
Sbjct:    1 MGLFGKTQEKPPKELVNEWSLKIRKEMRVVDRQIRDIQREEEKVKRSVKDAAKKGQKDVCIVLAKEMIRSRKAVSKLYASKAHMNSVLMGMKNQLAV 97
The following BLAST results are available for this feature:
BLAST of TCONS_00004649-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CHMP35.441e-4169.07Charged multivesicular body protein 3 OS=Homo sapi... [more]
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