TCONS_00004400-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00004400-protein
Unique NameTCONS_00004400-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length105

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00004400-protein ID=TCONS_00004400-protein|Name=TCONS_00004400-protein|organism=Clytia hemisphaerica|type=polypeptide|length=105bp
MSYRNISSSGYGRKKASHFPTSPQPKSVLRPKQWDPYVEEAYRFQVAGYR
DEKEYKHLQNDEEVDRWPDTGYVKKLQRKDGTFYYYSKARECKEKDVNRT
KLYAY
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_002460XLOC_002460Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00004400TCONS_00004400Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020186Meiosis-expressed_gene_1
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005634 nucleus
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020186Meiosis-expressed gene 1 proteinPFAMPF15163Meiosis_exprcoord: 29..103
e-value: 1.2E-35
score: 121.9
IPR020186Meiosis-expressed gene 1 proteinPRODOMPD062760coord: 20..103
e-value: 1.0E-26
score: 291.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..31

Blast
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BLAST of TCONS_00004400-protein vs. Swiss-Prot (Human)
Match: MEIG1 (Meiosis expressed gene 1 protein homolog OS=Homo sapiens GN=MEIG1 PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 5.355e-32
Identity = 49/85 (57.65%), Postives = 64/85 (75.29%), Query Frame = 0 
Query:   21 TSPQPKSVLRPKQWDPYVEEAYRFQVAGYRDEKEYKHLQNDEEVDRWPDTGYVKKLQRKDGTFYYYSKARECKEKDVNRTKLYAY 105
            +  +PKSV   K+W   +E  YRFQ AGYRDE EY+ ++    VDRWP+TGYVKKLQR+D TFYYY+K REC +K+V++ K+YAY
Sbjct:    4 SDVKPKSVSHAKKWSEEIENLYRFQQAGYRDETEYRQVKQVSMVDRWPETGYVKKLQRRDNTFYYYNKQRECDDKEVHKVKIYAY 88
The following BLAST results are available for this feature:
BLAST of TCONS_00004400-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MEIG15.355e-3257.65Meiosis expressed gene 1 protein homolog OS=Homo s... [more]
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