TCONS_00004322-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00004322-protein
Unique Name	TCONS_00004322-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	421

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00004322-protein ID=TCONS_00004322-protein|Name=TCONS_00004322-protein|organism=Clytia hemisphaerica|type=polypeptide|length=421bp
MMKRFVTILGVSTLGIIVVLYLTNENSRSQINYGSPNFLLKTTNLPQVVH
SKDNKFENEDDLVNELEKHSKTRKPFNGARSEHDQITAEELEDFHDKNDE
EFDKINEIDIGINKDKGNRVHIEKTLNTPKTTPTLLESQTPSINGIKMEG
KLKKRFPQAIIAGVKKCGTRALLSFVGRHPLVKSAGMEMHFFDKNDTYQE
GLDWYLDQMPESYENQVTIEKTPGYYVKPYVPKRVYEFSKTVKLIFIYRE
PVERAISDYTQALANEKDVKFEKLILTKTKPRKINEKSSKVDIGIYSKHL
MRWLQYFPKKQMHFVNGDEFIKNPVPQLIEVQKFLELPVLLDERHFVFNK
TKGFYCVKDTDETDGKCLGDSKGRTHPTVKRSARRKLKDFYKFHNEVFFN
LIGKNFGWPTTKYDPEENYKT

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_002402	XLOC_002402	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00004322	TCONS_00004322	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000863	Sulfotransferase_dom
IPR027417	P-loop_NTPase

Vocabulary: **Molecular Function**
Term	Definition
GO:0008146	sulfotransferase activity

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0008146	sulfotransferase activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000863	Sulfotransferase domain	PFAM	PF00685	Sulfotransfer_1	coord: 157..373 e-value: 9.4E-30 score: 103.9
None	No IPR available	GENE3D	3.40.50.300		coord: 137..421 e-value: 3.8E-61 score: 206.6
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 149..412

Blast

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BLAST of TCONS_00004322-protein vs. Swiss-Prot (Human)
Match: HS3SA (Heparan sulfate glucosamine 3-O-sulfotransferase 3A1 OS=Homo sapiens GN=HS3ST3A1 PE=1 SV=1)

HSP 1 Score: 249.98 bits (637), Expect = 5.077e-79
Identity = 122/257 (47.47%), Postives = 165/257 (64.20%), Query Frame = 0

Query:  154 KRFPQAIIAGVKKCGTRALLSFVGRHPLVKSAGMEMHFFDKNDTYQEGLDWYLDQMPESYENQVTIEKTPGYYVKPYVPKRVYEFSKTVKLIFIYREPVERAISDYTQALANEKDV-KFEKLILTKTKPRKINEKSSKVDIGIYSKHLMRWLQYFPKKQMHFVNGDEFIKNPVPQLIEVQKFLELPVLLDERHFVFNKTKGFYCVKDTDETD-GKCLGDSKGRTHPTVKRSARRKLKDFYKFHNEVFFNLIGKNFGW 408
            K+ PQAII GVKK GTRALL F+  HP V++ G E HFFD++  Y +GL WY D MP + + Q+T+EKTP Y+V    P R+   SK  KLI + R+PV RAISDYTQ L+   D+  FE L         I+   S + IGIY+KHL  WL++FP +QM FV+G+  I +P  +L  VQ FL L  ++ ++HF FNKTKGF C+K  + +    CLG +KGRTHP + R   R+L++FY+  N  F+ + G +FGW
Sbjct:  150 KQLPQAIIIGVKKGGTRALLEFLRVHPDVRAVGAEPHFFDRS--YDKGLAWYRDLMPRTLDGQITMEKTPSYFVTREAPARISAMSKDTKLIVVVRDPVTRAISDYTQTLSKRPDIPTFESLTFKNRTAGLIDTSWSAIQIGIYAKHLEHWLRHFPIRQMLFVSGERLISDPAGELGRVQDFLGLKRIITDKHFYFNKTKGFPCLKKAEGSSRPHCLGKTKGRTHPEIDREVVRRLREFYRPFNLKFYQMTGHDFGW 404

The following BLAST results are available for this feature:

BLAST of TCONS_00004322-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00004322-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
HS3SA	5.077e-79	47.47	Heparan sulfate glucosamine 3-O-sulfotransferase 3...	[more]

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TCONS_00004322-protein (polypeptide) - C. hemisphaerica