TCONS_00004296-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00004296-protein
Unique Name	TCONS_00004296-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	850

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00004296-protein ID=TCONS_00004296-protein|Name=TCONS_00004296-protein|organism=Clytia hemisphaerica|type=polypeptide|length=850bp
MYYIGNLVKSVTGVYNQINSATLTGAIDIVVVKQADGTFIGSPFHVRFGK
LGVLSSTEKVVEISINDEEVDIQMKLGQAGEAFFVEKIASSPDGDIVPYN
LATSPIPSSTFLTDEQFNFKKVQRRDDMMETETNFPENPVILPEIVEHKA
KTKDDNTSLSRTFSEPISIKKAQNSIHLSPKQNRHAIQRISEMQSEYPLS
DMDSPLSGSPPDDDSTRRIYSDTEVEGHLTLAKNTSLPEDKGQDPDMTWE
WGMLPEGKIAVQKPPTKTPRSAHAHEKSGKKHHRKHRTKGGARPKMKVPS
EGLLLDEVLGMEDKEVADLYFNRGNSLDDLVLDEDTIDARGESTPAVDAV
KEKNPFSFNNTSPIKAKQQEDPEVTKEEDKMQEAVEKKSDEEVVINVEEM
AICSETSVGSKEEGDEKGDETLPLGDEVEEPKDIVLSLCGGLMSRRVVPE
KFNDFVVSYDGFCQNPSVILSNPKLVIKINESYYNWAVAGPYLVSYMAYD
KTLQPDSLKMLKQRHMPRKRRGWFQWRTPQEQESSEDEIHIKILKEDQSM
DKLSEADVEADLDSNQGGGSDTQVLLSDDENQAEYKKTLRLTSSQWESLK
LKPGKNTVTFTVTTRYQGKAEAKARIFLWSHENKVVISDIDGTITKSDVL
GQILPAMGRDWSQTGVTGLFSKIRNNGYNFIYLSARAISQADLTRNFLGN
IKQGELTLPEGPVLLTPTSLVTAFRKEVIERKPEEFKISCMKDIQSLYDK
KSNPFFAGFGNRINDVYAYRAVGIPISRIFTINYRGEIKHEISTAFSTSY
SELIGMVDQMFPPMTPGRSIDSTESEFTSFSYWRAPLIPLDGVDELESLP

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_002385	XLOC_002385	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00004296	TCONS_00004296	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR031315	LNS2/PITP
IPR031703	Lipin_mid
IPR013209	LNS2
IPR007651	Lipin_N
IPR023214	HAD-like_dom

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR031315	LNS2/PITP	SMART	SM00775	lns2	coord: 635..791 e-value: 8.3E-98 score: 340.9
IPR031703	Lipin, middle domain	PFAM	PF16876	Lipin_mid	coord: 435..526 e-value: 3.5E-22 score: 78.3
IPR013209	Lipin/Ned1/Smp2 (LNS2)	PFAM	PF08235	LNS2	coord: 587..812 e-value: 9.6E-98 score: 326.0
IPR007651	Lipin, N-terminal	PFAM	PF04571	Lipin_N	coord: 1..105 e-value: 3.8E-39 score: 132.7
IPR023214	HAD-like domain	GENE3D	3.40.50.1000		coord: 631..791 e-value: 2.5E-7 score: 30.0
IPR023214	HAD-like domain	SUPERFAMILY	56784	HAD-like	coord: 629..783
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 260..297
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 197..247
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 353..390
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 405..427

Blast

[Close]

BLAST of TCONS_00004296-protein vs. Swiss-Prot (Human)
Match: LPIN2 (Phosphatidate phosphatase LPIN2 OS=Homo sapiens GN=LPIN2 PE=1 SV=1)

HSP 1 Score: 438.728 bits (1127), Expect = 1.629e-140
Identity = 318/931 (34.16%), Postives = 471/931 (50.59%), Query Frame = 0

Query:    1 MYYIGNL----VKSVTGVYNQINSATLTGAIDIVVVKQADGTFIGSPFHVRFGKLGVLSSTEKVVEISINDEEVDIQMKLGQAGEAFFVEKIASSPDGDIVPYNLATSPIPSSTFLTDEQFNFKKV--------------QRRD--DMMETETNFPENPVILP------------EIVEHKAKTKDDNTSLSRTFSEPISIKKAQNSIHLSPKQNRHAIQRISEMQSEYPLSDMD-SPLSGSPPDDDSTRRIYSDTEVEGHLTLAKNTSLPEDKGQDPDMTWEWGMLPEG-KIAVQKPPTKTPRSAHAHEKSGKKHHRKHRTKGGARPKMKVPSEGLLLDEV---LGMEDKEVADLYFNRGNSLDDLVLDEDTIDARGESTPAVDAVKEKNPFSFN---NTSPIKAKQQEDPEVTKEEDKMQEAVEKKS----------DEEVVINVEEMAIC---SETSVGSKE--EGDEKGDETLP--------------LGDEVEEPKDIVLSLCGGLMSR-RVVPEKFNDFVVSYDGFCQNPSVILSNPKLVIKINESYYNWAVAGPYLVSYMAYDKTLQPDSLKMLKQRHMPRKRRGWFQWR-----TPQEQESSEDEIHIKILKEDQSMDKLSEADVEADLDSNQGGGS-DTQVLLSDDENQAE---------YKKTLRLTSSQWESLKLKPGKNTVTFTVTTRYQGKAEAKARIFLWSHENKVVISDIDGTITKSDVLGQILPAMGRDWSQTGVTGLFSKIRNNGYNFIYLSARAISQADLTRNFLGNIKQGELTLPEGPVLLTPTSLVTAFRKEVIERKPEEFKISCMKDIQSLYDKKSNPFFAGFGNRINDVYAYRAVGIPISRIFTINYRGEIKHEISTAFSTSYSELIGMVDQMFPPMTPGRSIDSTESEFTSFSYWRAPLIPLDGVDEL 846
            M Y+G L    + +V  +Y  IN ATL+G ID++VV+Q DG++  SPFHVRFGKLGVL S EKV++I IN   VD+ MKLG  GEAFFVE+     +   +P  LATSPIP     T++QF FK +              Q  D   ++ETET F  + V               +  +  +   +D   +  +  +    + A+ S + S K+       +      YPLSD D SPL  + P   +  +  S+ EV+   +L ++ S          M W WG  PE  K++ ++     PR+A     S   H R             +PSE  L+ EV     MED  V  +   +  +L   + D  ++    E  P +++ +  +    +   N +  +A  +  P    +    ++ V K+S          D+   +  E  A+    SE+  GS++  E D       P              L D   +  D+ LSLCGGL     +  EKF + +++Y  F +NP +I  NP LVI+I   YYNWA+A P ++S   + K+L   +++   +  MP+K   W+ WR     T Q  ES E +       +  S  K       A+ DS+   GS + +  ++ D    E         YKK+LRL+S Q   LKL  G N V F++TT+YQG       I+LW+  +K++ISDIDGTITKSD LGQILP +G+DW+  G+  L+  I  NGY F+Y SARAI  AD+TR +L  +      LP GP++L+P+SL +AF +EVIE+KPE+FKI C+ DI++L+     PF+A FGNR NDVYAY  VG+P  RIFT+N +GE+  E +    +SY  L  +V+ +FP ++  ++      EF+SF YWR P+  +D +D+L
Sbjct:    1 MNYVGQLAGQVIVTVKELYKGINQATLSGCIDVIVVQQQDGSYQCSPFHVRFGKLGVLRSKEKVIDIEINGSAVDLHMKLGDNGEAFFVEETEEEYEK--LPAYLATSPIP-----TEDQF-FKDIDTPLVKSGGDETPSQSSDISHVLETETIFTPSSVKKKKRRRKKYKQDSKKEEQAASAAAEDTCDVGVSSDDDKGAQAARGSSNASLKEEECKEPLLFHSGDHYPLSDGDWSPLETTYP-QTACPKSDSELEVKPAESLLRSES---------HMEWTWGGFPESTKVSKRERSDHHPRTATI-TPSENTHFR------------VIPSEDNLISEVEKDASMEDT-VCTIVKPKPRALGTQMSDPTSVAELLE--PPLESTQISSMLDADHLPNAALAEAPSESKPAAKVDSPSKKKGVHKRSQHQGPDDIYLDDLKGLEPEVAALYFPKSESEPGSRQWPESDTLSGSQSPQSVGSAAADSGTECLSDSAMDLPDVTLSLCGGLSENGEISKEKFMEHIITYHEFAENPGLI-DNPNLVIRIYNRYYNWALAAPMILSLQVFQKSLPKATVESWVKDKMPKKSGRWWFWRKRESMTKQLPESKEGKSEAPPASDLPSSSKEPAGARPAENDSSSDEGSQELEESITVDPIPTEPLSHGSTTSYKKSLRLSSDQIAKLKLHDGPNDVVFSITTQYQGTCRCAGTIYLWNWNDKIIISDIDGTITKSDALGQILPQLGKDWTHQGIAKLYHSINENGYKFLYCSARAIGMADMTRGYLHWVNDKGTILPRGPLMLSPSSLFSAFHREVIEKKPEKFKIECLNDIKNLFAPSKQPFYAAFGNRPNDVYAYTQVGVPDCRIFTVNPKGELIQERTKGNKSSYHRLSELVEHVFPLLSKEQNSAFPCPEFSSFCYWRDPIPEVD-LDDL 895

The following BLAST results are available for this feature:

BLAST of TCONS_00004296-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00004296-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
LPIN2	1.629e-140	34.16	Phosphatidate phosphatase LPIN2 OS=Homo sapiens GN...	[more]

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TCONS_00004296-protein (polypeptide) - C. hemisphaerica