TCONS_00004231-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00004231-protein
Unique NameTCONS_00004231-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length214

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00004231-protein ID=TCONS_00004231-protein|Name=TCONS_00004231-protein|organism=Clytia hemisphaerica|type=polypeptide|length=214bp
MEQAVQQQIVQAAKVVESMVDKEMDRLDNLGGDDLQRIRQERLNEMKKMV
ERKEQWKQIGHGKYEELKDEKEFFEEQKKSERFVCHFYRESTFRCKIIDK
HLDILARKHIETRFVKIDAERSMWLAQRLKVKVLPTLACIKDSKTKDFIV
GFDDLGGVDDFPTEMLEWRLGMADMINYNGDKPALKKKAQTRVFGFAGKS
KNIRDDGESDDDSD
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_002355XLOC_002355Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00004231TCONS_00004231Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013766Thioredoxin_domain
IPR012336Thioredoxin-like_fold
Vocabulary: Biological Process
TermDefinition
GO:0045454cell redox homeostasis
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045454 cell redox homeostasis
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.30.10coord: 46..179
e-value: 1.3E-15
score: 56.7
NoneNo IPR availableCDDcd02989Phd_like_TxnDC9coord: 60..171
e-value: 3.02494E-58
score: 180.462
IPR013766Thioredoxin domainPFAMPF00085Thioredoxincoord: 70..151
e-value: 1.4E-7
score: 31.3
IPR012336Thioredoxin-like foldSUPERFAMILY52833Thioredoxin-likecoord: 12..171

Blast
[Close]
BLAST of TCONS_00004231-protein vs. Swiss-Prot (Human)
Match: TXND9 (Thioredoxin domain-containing protein 9 OS=Homo sapiens GN=TXNDC9 PE=1 SV=2)

HSP 1 Score: 214.927 bits (546), Expect = 1.021e-70
Identity = 89/179 (49.72%), Postives = 142/179 (79.33%), Query Frame = 0 
Query:    3 QAVQQQIVQAAKVVESMVDKEMDRLDNLGGDDLQRIRQERLNEMKKMVERKEQWKQIGHGKYEELKDEKEFFEEQKKSERFVCHFYRESTFRCKIIDKHLDILARKHIETRFVKIDAERSMWLAQRLKVKVLPTLACIKDSKTKDFIVGFDDLGGVDDFPTEMLEWRLGMADMINYNGD 181
            + ++ Q++Q  K+VE  +D E+ +LD +  D+L+R++++RL  ++K  ++K++W   GHG+Y E+  E++FF+E K+SE  VCHFYR+STFRCKI+D+HL IL++KH+ET+F+K++ E++ +L +RL +KV+PTLA +KD KT+D++VGF DLG  DDF TE LEWRLG +D++NY+G+
Sbjct:   12 KVLEHQLLQTTKLVEEHLDSEIQKLDQMDEDELERLKEKRLQALRKAQQQKQEWLSKGHGEYREIPSERDFFQEVKESENVVCHFYRDSTFRCKILDRHLAILSKKHLETKFLKLNVEKAPFLCERLHIKVIPTLALLKDGKTQDYVVGFTDLGNTDDFTTETLEWRLGSSDILNYSGN 190
The following BLAST results are available for this feature:
BLAST of TCONS_00004231-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TXND91.021e-7049.72Thioredoxin domain-containing protein 9 OS=Homo sa... [more]
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