TCONS_00004187-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00004187-protein
Unique NameTCONS_00004187-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length478

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00004187-protein ID=TCONS_00004187-protein|Name=TCONS_00004187-protein|organism=Clytia hemisphaerica|type=polypeptide|length=478bp
QMLIQSTPHGEKQRVVTDIQFTDKMPSLSRRACTKSKGQPNLLHTAWYRH
HQNPYHPQQNPDGIINLGTAENRLLFDLIQEKLADIKLDQMHESYTHYCK
LSGTDAFRQKLSAFFNRFMHPQEKIVEQDVYVMNGCGTVIETIGRSICNE
GDGVLIPAPYYTGFKSDLEQRIAVKTIPVHLDCQGKQAFQITLQKLEEAL
EGAEDSGIPVKALLLSNPNNPLGTVYTEEELEMMAEFCYNNDLHLVCDEI
YLLSVYDQNASFKSLLSIKNFHKYRDHIHVVWGFSKDFSLSGFRVGVAIT
KNEELQHDLGSQGYYTSVSTVTQYILEEMITDSQWLDKLVQINHQRLQQN
RNLVAKKLSQTNIPFVYPQSGVFVWMNLSKCMKDQSIQSETELFEKLMKN
GLYLVPGQAFETKENGWFRMIISNEYQTVELALQRLLNIVRKPERIECGV
RHSSSDSVQSLEIFARRHVHPKTMKKNN
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_002335XLOC_002335Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00004187TCONS_00004187Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004839Aminotransferase_I/II
IPR015421PyrdxlP-dep_Trfase_major_sub1
IPR015422PyrdxlP-dep_Trfase_sub2
IPR004838NHTrfase_class1_PyrdxlP-BS
IPR015424PyrdxlP-dep_Trfase
Vocabulary: Biological Process
TermDefinition
GO:0009058biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0030170pyridoxal phosphate binding
GO:0003824catalytic activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009058 biosynthetic process
molecular_function GO:0003824 catalytic activity
molecular_function GO:0030170 pyridoxal phosphate binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 186..206
NoneNo IPR availablePRINTSPR00753ACCSYNTHASEcoord: 309..332
score: 29.92
coord: 243..266
score: 34.49
coord: 151..172
score: 52.46
coord: 277..301
score: 43.87
coord: 67..93
score: 33.88
coord: 207..231
score: 49.64
NoneNo IPR availableCDDcd00609AAT_likecoord: 65..436
e-value: 1.40666E-62
score: 207.964
IPR004839Aminotransferase, class I/classIIPFAMPF00155Aminotran_1_2coord: 65..435
e-value: 1.9E-59
score: 201.6
IPR015421Pyridoxal phosphate-dependent transferase, major region, subdomain 1GENE3D3.40.640.10coord: 103..330
e-value: 3.6E-38
score: 131.0
IPR015422Pyridoxal phosphate-dependent transferase, subdomain 2GENE3D3.90.1150.10coord: 331..443
e-value: 3.7E-20
score: 71.7
IPR004838Aminotransferases, class-I, pyridoxal-phosphate-binding sitePROSITEPS00105AA_TRANSFER_CLASS_1coord: 283..296
IPR015424Pyridoxal phosphate-dependent transferaseSUPERFAMILY53383PLP-dependent transferasescoord: 35..441

Blast
[Close]
BLAST of TCONS_00004187-protein vs. Swiss-Prot (Human)
Match: 1A1L2 (Probable inactive 1-aminocyclopropane-1-carboxylate synthase-like protein 2 OS=Homo sapiens GN=ACCSL PE=2 SV=3)

HSP 1 Score: 273.863 bits (699), Expect = 9.661e-86
Identity = 136/398 (34.17%), Postives = 234/398 (58.79%), Query Frame = 0 
Query:   50 HHQNPYHPQQNPDGIINLGTAENRLLFDLIQEKLADIKLDQMHESYTHYCKLSGTDAFRQKLSAFFNRFMHPQEKIVEQDVYVMNGCGTVIETIGRSICNEGDGVLIPAPYYTGFKSDLEQRIAVKTIPVHLDCQ----GKQAFQITLQKLEEALEGAEDSGIPVKALLLSNPNNPLGTVYTEEELEMMAEFCYNNDLHLVCDEIYLLSVYDQNASFKSLLSIKNFHKYRDHIHVVWGFSKDFSLSGFRVGVAITKNEELQHDLGSQGYYTSVSTVTQYILEEMITDSQWLDKL-VQINHQRLQQNRNLVAKKLSQTNIPFVYPQSGVFVWMNLSKCMKDQSIQSETELFEKLMKNGLYLVPGQAFETKENGWFRMIISNEYQTVELALQRLLNIVRK 442
            + ++ YH  +N  G INLGT+EN+L  DL+ E+L +  ++ + ++   Y    G    R++++ F   +     ++  ++V V+NGC +V   +   +C+ G+  L+PAP+Y GF         V+ IPVHL+ +        FQ+T+ KLEEAL  A   G  V+ L+L NP NPLG +Y+ + L    EF    +LH++ DEIY+LSV+D++ +F S+LS+K+     +  HV+WG SKDF +SGFR G   T N+E+   + + GY  S+S +TQ+ L +++ +++W+DK+ +  N  RL++    +  +L    IPF    SG++VW+NL K +   + + E  L+ + + N L L  G+ +  KE GWF +I ++E   ++LA++R  +++++
Sbjct:  156 YQKDKYHKDKNTLGFINLGTSENKLCMDLMTERLQESDMNCIEDTLLQYPDWRGQPFLREEVARFLTYYCRAPTRLDPENVVVLNGCCSVFCALAMVLCDPGEAFLVPAPFYGGFAFSSRLYAKVELIPVHLESEVTVTNTHPFQLTVDKLEEALLEARLEGKKVRGLVLINPQNPLGDIYSPDSLMKYLEFAKRYNLHVIIDEIYMLSVFDESITFHSILSMKSLPD-SNRTHVIWGTSKDFGISGFRFGALYTHNKEVASAVSAFGYLHSISGITQHKLCQLLQNTEWIDKVYLPTNCYRLREAHKYITAELKALEIPFHNRSSGLYVWINLKKYLDPCTFEEERLLYCRFLDNKLLLSRGKTYMCKEPGWFCLIFADELPRLKLAMRRFCDVLQE 552
The following BLAST results are available for this feature:
BLAST of TCONS_00004187-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
1A1L29.661e-8634.17Probable inactive 1-aminocyclopropane-1-carboxylat... [more]
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